Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1231 ATGAATGAAATTGTATCTGGTGTGGCGAGTGCTTTATTGGCAAATCTCACAACCAAAGCTTATCATAAGACTGTGTGGGTATGTGGTCTCAAACGTGAAGTAGAGAGGCTTGAAAAGTCTGTGAAACTCCTCAGTGCCTTTCTTTCTGATGCTGAAAACAAGCAATTCAAAGACCAAAGCATAGCCCTATGGTTGGAAGAACTTAAACATGCACTCTATGATGCAGTTGACATATTGGATGAAATTGAGCATCAGGCAAATAAAAGTAAAGTGATGAAAATGCATGGAGGTGTTTCTCAAAAGGTGTGTCAATTTTTCTCAGGATCAAACTCACTTGTATTTCATGTCAAAATAGCTCACAAAATTAAGGAGATTAGAGAAAGGATTGATGAGATTGCACGTGAAAGGAACAATCTCGGTCTCATTCAACATTCTACAAATGACATGGCTCCCAATAAAATGTTACCATGGAGGGAGACCCATTCTTCTCTACCTTCACGAATAACAGGTAGAGATGAAGAAAAGGAACTTATCATAAGTTTATTGATGAGTGAACCATCACAATCACAAAGCAAAAATGTTACCGTCATCCCAATTGTTGCAATGGGAGGGTGTGGGAAGACCACACTTGCCCAATTGGTGTTCAACGATTCAAGAATAGCTGATCATTATGATTTAAAATTGTGGGTGCATGTGTCACAAGACTTTGATATTAAAAGAATAATATCAAAAATTGTTACACAAGAAGATGATACAAAAGGTAGAGGCGGTGAAGACTCGACCTTAGAAAGGTTGAAGACACTTCTTCATGAGAAATTATATGAGAAGAAGTTTTTACTTGTCCTTGATGACATGTGGAATGAAAATGCTAAAAGATGGCATGATCTACGGGATCTCCTGTTAGATACAATTGGTGAAAGGAACAAAAATGATTGCAAAATCATAGTGACTACCCGTAGTGACAGAGTTGCTGATATTGTGAAGACTGTTACTAAAATCAACTTACAAGTACTCCCAGAAGAGGAATGTTTGAAGTTATTTTTTAAGTGTGCCTTTCAAGAAGAGGGGGAAGCAAATCAATGCCCCAGGCTTCAAGAAATTGGGAAGGAAATTGTTGCAAAGTGCAAAGGGTTGCCACTAGCCATAGTGACTTTAGGGTGCATTCTTAGGTCACAAGAAGATGAAAATGAGTGGAAAAGAATCCGAGAGAGTGAGATATGGGAAATCGATCATCAAAAAGATGACGAAATATTACCAGCATTAAGGCTAAGCTATTCTCAATTGCCATCTCCTCTGAAGCAATGTTTTTCTTATTGTGCTCTTTTCCCTAAAGGTCATGAATATTGTCCAATAGAATTGATTCCAATTTGGATGGCCCACGGACTTCTCCAACCCACGAATGAAAATGAAGATCCAGTGTGTCTTGGAGAGTTATATTTCAGGCAATTAATTTCAATGTCCTTCTTTCAATTTGAAGATGAATTCGACTCGCCTCTTGATTACGAAGTAGAGAAAGTTTTTGGCTCTGATTGTTACATAATGCATGATCTGATCCATGATCTTGCTATGTCGACGATGCATGGTGAGACTACAGTGATGAGTAGTGCATCTACATATGTCAGTGAAAAAGTACGACATATATCAATTTCAACCATCCCAGACCAATTTCTTTCGCTATCCCTGAAGAAAAACAAGGTTCGATCATTTGGAAATTGGCATACACAAGGATCTATCACCACGACAGAACCATTTGTAAAGTGGATCTTTAAAGAATTTAAGTACTTAAGGGTGTTGGATTTGCAAGATTTGGAATTTCAGTTCCTGCCTGATTGCTTCGACAAGATGAAGCATTTGAGATATCTTAATCTGAGTCTTTGCTCTGAGTTGAAAAAACTCCCCAAGTCCATTTCCAAGCTCTATAATCTCCAGACTTTAATTCTTGAAGACTGTGACGCACTTCAAGAGTTACCCAAAAACTTGAGGAACCTTATCAACCTTCGATTTTTTATGATTACTGCACAAATCACAAATCTCTGCTTTGTAGATATAAGGTTCTTTAGATCCCTTCAAATTTTAATAATTTCCCGTTGTGATAACTTAGAAGCCATACCGTGTGATTTATCACATTTGGTTTCTTTGAAGAAGCTGGTAATTATGGAGTGTGAAAAGCTAGTTCGTTTTGAAGACGAAGTTGAAAATGAAGGAGGAGGAAAGCAAAATGAAATTGTCAAGGATATGAATCTTCAAATATTATTTATTGAACTATCGCCCATGTTGATCAACTTACCCAACTGGCTTCAAAGATCTGCCAAGACTTTACAACAAATTTGTATTTCTGAAACAAGTTTAACAGCATTGCCAGAATGGCTTCCGAATGCAACATCACTTCGCATGCTTTACATTGAAGAATGTGAAGAGTTGTTGTCACTGCCTGAGAATATGGATCACTGTCGTAGCCTTCAAAAGTTAAGAATAATTCGTTGCCCAAATCTGAGTGAAAGGTACAAAAGGGATGTAGGCCCAGAATGGAGCAAAATATCTCATGTCCCAAATGTTTATGTAAGTTTCTGA 2571 0.3761 MNEIVSGVASALLANLTTKAYHKTVWVCGLKREVERLEKSVKLLSAFLSDAENKQFKDQSIALWLEELKHALYDAVDILDEIEHQANKSKVMKMHGGVSQKVCQFFSGSNSLVFHVKIAHKIKEIRERIDEIARERNNLGLIQHSTNDMAPNKMLPWRETHSSLPSRITGRDEEKELIISLLMSEPSQSQSKNVTVIPIVAMGGCGKTTLAQLVFNDSRIADHYDLKLWVHVSQDFDIKRIISKIVTQEDDTKGRGGEDSTLERLKTLLHEKLYEKKFLLVLDDMWNENAKRWHDLRDLLLDTIGERNKNDCKIIVTTRSDRVADIVKTVTKINLQVLPEEECLKLFFKCAFQEEGEANQCPRLQEIGKEIVAKCKGLPLAIVTLGCILRSQEDENEWKRIRESEIWEIDHQKDDEILPALRLSYSQLPSPLKQCFSYCALFPKGHEYCPIELIPIWMAHGLLQPTNENEDPVCLGELYFRQLISMSFFQFEDEFDSPLDYEVEKVFGSDCYIMHDLIHDLAMSTMHGETTVMSSASTYVSEKVRHISISTIPDQFLSLSLKKNKVRSFGNWHTQGSITTTEPFVKWIFKEFKYLRVLDLQDLEFQFLPDCFDKMKHLRYLNLSLCSELKKLPKSISKLYNLQTLILEDCDALQELPKNLRNLINLRFFMITAQITNLCFVDIRFFRSLQILIISRCDNLEAIPCDLSHLVSLKKLVIMECEKLVRFEDEVENEGGGKQNEIVKDMNLQILFIELSPMLINLPNWLQRSAKTLQQICISETSLTALPEWLPNATSLRMLYIEECEELLSLPENMDHCRSLQKLRIIRCPNLSERYKRDVGPEWSKISHVPNVYVSF* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1231 856 PRINTS Disease resistance protein signature 196 211 - -
Apr4g1231 856 PRINTS Disease resistance protein signature 272 286 - -
Apr4g1231 856 PRINTS Disease resistance protein signature 375 389 - -
Apr4g1231 856 PRINTS Disease resistance protein signature 613 629 - -
Apr4g1231 856 Pfam NB-ARC domain 189 426 IPR002182 GO:0043531
Apr4g1231 856 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 439 IPR027417 -
Apr4g1231 856 CDD RX-CC_like 27 134 IPR038005 -
Apr4g1231 856 SUPERFAMILY L domain-like 514 834 - -
Apr4g1231 856 Gene3D - 9 123 - -
Apr4g1231 856 Gene3D Ribonuclease Inhibitor 739 839 IPR032675 -
Apr4g1231 856 Gene3D Ribonuclease Inhibitor 537 733 IPR032675 -
Apr4g1231 856 Pfam Rx N-terminal domain 9 95 IPR041118 -
Apr4g1231 856 Gene3D - 337 429 IPR042197 -
Apr4g1231 856 PANTHER DISEASE RESISTANCE PROTEIN RP 24 835 IPR044974 GO:0006952
Apr4g1231 856 Coils Coil 34 54 - -
Apr4g1231 856 Gene3D - 156 334 IPR027417 -
Apr4g1231 856 PANTHER OS08G0543100 PROTEIN 24 835 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1231 Apr-Chr4 11043973 11046543 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1231 190 831 WRKY Transcription Factor Family AT5G45050 22.727 5.47e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1231 - - aprc:113862174 1394.79