Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1230 ATGAGTGAAATTGTATCTGGTGTGGCGAGTGCTTTATTGGCAAATCTCACAACCAAAGCTTATCATAAGATTGTGTGGGTATGTGGTCTCAAACGTGAAGTAGAGAGGCTTAAAAAGTCTGTGAAACTCGTCAGTGCCTTTCTTTCTGATGCTGAAAACAAGCAATTCAAAGACCAAAGCATAGCCCTATGGTTGAAAGAACTTAAACATGCACTCTATGATGCAGTTGACATATTGGATGAAATTGAGTGTCAAGAAAATATAAGTAAAGCGATGAAAATACATGGAGGTGTTTCTCAAAAGGTGTGTCAATTTTTCTCAGCATCAAACCCACTTGTATTTCATGTCAACATGGCTCACAAAATTAAGGAGATTAGAGAAAAGATTGATGAGATTGCACGTGAAAGGAACAATCTCGGTCTCATTCAAAATTCTACAAATGACATGGCTCCCAATAAAATGTTATCATGGAGGGAGACCCATTCTTCTCTACCTTCACGAATAACAGGTAGAGATGAAGAAAAGGAACTTATCATAAGTTTATTGATGAGTGAACCATCACAATCACAAAGCAAAAATGTTACTGTCATCCCAATTGTTGCAATGGGAGGGTGTGGGAAGACCACACTTGCCCAATTTGTGTTCAACGATTCAAGAATAGCTGATCATTATGATTTAAAATTATGGGTGCATGTGTCACAAGATTTTGATGTTAAAAGAATAATTTCAAAAATTGTTACACAAGAAGATGATACAAAAGGCAGAGGCGGTGAAGGCATGACCTTAGAAAGGTTGAAGACACTTCTTCATGAGAAATTATACGACAAGAAATTTTTACTTGTCCTTGATGACATGTGGAATGAAAATGCTAAAAGATGGCATGATCTACGGGATCTCCTGTTGGATACAATTGGTGAAAGGAACAAAAATGATTGCAAAATCATAGTGACTACTCGTAGTGACAGAGTTGCTGATATTGTGAAGACTGTTACTAAAATCAAATTACAAGTACTCCCAGAAGAGGAATGTTTGCAGTTATTTTTTAAGTGTGCCTTTCAAGAAGAGGGGGAAGCAAATCAACGTCCCAGGCTTCAAGAAATTGGTAAGGAAATTGTTGCAAAGTGCAAAGGTTTGCCACTAGCCATAGTGACTTTAGGGTGCATTCTTAGGTCACAAGAAGATGAAAATGAGTGGAAAAGAATCCGAGATAGCGAGATATGGGAAATAGATCATCAAAAAGATGATGAAATATTACCAGCATTAAGGCTAAGCTATTCTCAATTGCCATCTCCTCTGAAGCAATGTTTTTCTTATTGTGCACTTTTCCCTAAAGGTCATGAATATATGCCAATAGAATTGATTCCAATTTGGATGGCACATGGAGTCCTCCGACCCACGAATGAAAATGAAGATCCAGAGTGTCTTGGAGAGTTACATTTCAGGCAATTAATTTCATTGTCCTTCTTTCAATTTGTAGATCAATTCCGCTCACCTTTTGAGGACGAATTACCTTTTGACTACGATGTAGGGAAAGTTTTGGGCATTGGAAGTTACATAATGCATGATCTGATCCATGATCTTGCTATGTCGACAATGCATGGTGAGACTACAGTGATAAGTAGCGCATCTACACATGTCAATGAAAAAGTACGACATATATCAATTTCAACCAACCCAGACCAATTGCCTCTGCTAGCCCTCAAGAAAAACAAGGTTCAATCATTTGTAAATTGGCACACACAAGGAGATATCACCACGACAGAACCATTTGTAAAATGGATCTCTAAAGAATTCAAGTACTTAAGGGTGTTGGATTTGCAAAATTTGGCATTTCAGTTCCTGCCTGATTTCTTCGACAAGATGAAGCATTTGAGATATCTTAATCTGAGTTGTTGCTCTCAGTTGAAAAAACTCCCCAAGTCCATTTCCAAGCTCTATAATCTCCAGACTTTAATTCTTCAGGGCTGTGTGGCACTTGAAGAGTTACCTAAAAACTTGAGGAACCTTATCAACCTTCGATTTTTTATGATTACTGCACAAATCACAAATCTCTGCTTTGTAGATATAAGGTTCTTCAGTTATCTTCAGATTTTAACAATTTTCAGTTGTCATAATTTAGAAGTCATGCCGTGTGATTTATCACATTTGGTTTCTTTGAAGAAGCTGGTAATTATGGGATGTGAAAAGCTAGTTCGTTTTGAAGACGAAGTTGAAAATGAAGGAAGAGGGAAGCAAAATGAAGTTGCCAAGGAAATGAATCTTCAAAGATTTGCTATTGCTGGATCGCCCAAGTTGATCAACTTACCCAACTGGCTTCAAAGATCTGCCAAGACTTTACAACAAATTTGTATTTGGGATACAAGTTTAACAGCATTGCCAGAATGGCTTCCAAATGCAACATCACTTAACAGTCTTTACATTTTAGATTGTGAAGAGTTGTTGTCACTGCCTGAGAATATGGATCACTGTCGCAGCCTTCAAACATTAGGAATAATTGGTTGCCCAGATCTGAGTAAAAGGTATAAAGGGGGTGTAGGCCCAGAATGGAGCAAAATAGCTCATGTCCCAAATGTCTACGTAAGTTTCTGCTAA 2592 0.3773 MSEIVSGVASALLANLTTKAYHKIVWVCGLKREVERLKKSVKLVSAFLSDAENKQFKDQSIALWLKELKHALYDAVDILDEIECQENISKAMKIHGGVSQKVCQFFSASNPLVFHVNMAHKIKEIREKIDEIARERNNLGLIQNSTNDMAPNKMLSWRETHSSLPSRITGRDEEKELIISLLMSEPSQSQSKNVTVIPIVAMGGCGKTTLAQFVFNDSRIADHYDLKLWVHVSQDFDVKRIISKIVTQEDDTKGRGGEGMTLERLKTLLHEKLYDKKFLLVLDDMWNENAKRWHDLRDLLLDTIGERNKNDCKIIVTTRSDRVADIVKTVTKIKLQVLPEEECLQLFFKCAFQEEGEANQRPRLQEIGKEIVAKCKGLPLAIVTLGCILRSQEDENEWKRIRDSEIWEIDHQKDDEILPALRLSYSQLPSPLKQCFSYCALFPKGHEYMPIELIPIWMAHGVLRPTNENEDPECLGELHFRQLISLSFFQFVDQFRSPFEDELPFDYDVGKVLGIGSYIMHDLIHDLAMSTMHGETTVISSASTHVNEKVRHISISTNPDQLPLLALKKNKVQSFVNWHTQGDITTTEPFVKWISKEFKYLRVLDLQNLAFQFLPDFFDKMKHLRYLNLSCCSQLKKLPKSISKLYNLQTLILQGCVALEELPKNLRNLINLRFFMITAQITNLCFVDIRFFSYLQILTIFSCHNLEVMPCDLSHLVSLKKLVIMGCEKLVRFEDEVENEGRGKQNEVAKEMNLQRFAIAGSPKLINLPNWLQRSAKTLQQICIWDTSLTALPEWLPNATSLNSLYILDCEELLSLPENMDHCRSLQTLGIIGCPDLSKRYKGGVGPEWSKIAHVPNVYVSFC* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1230 863 Pfam NB-ARC domain 189 426 IPR002182 GO:0043531
Apr4g1230 863 Pfam Rx N-terminal domain 9 90 IPR041118 -
Apr4g1230 863 PRINTS Disease resistance protein signature 196 211 - -
Apr4g1230 863 PRINTS Disease resistance protein signature 272 286 - -
Apr4g1230 863 PRINTS Disease resistance protein signature 375 389 - -
Apr4g1230 863 PRINTS Disease resistance protein signature 619 635 - -
Apr4g1230 863 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 439 IPR027417 -
Apr4g1230 863 CDD RX-CC_like 27 134 IPR038005 -
Apr4g1230 863 PANTHER DISEASE RESISTANCE PROTEIN RP 26 843 IPR044974 GO:0006952
Apr4g1230 863 Coils Coil 115 135 - -
Apr4g1230 863 Gene3D Ribonuclease Inhibitor 564 851 IPR032675 -
Apr4g1230 863 SUPERFAMILY L domain-like 520 837 - -
Apr4g1230 863 Gene3D - 337 429 IPR042197 -
Apr4g1230 863 Gene3D - 153 334 IPR027417 -
Apr4g1230 863 Gene3D - 9 123 - -
Apr4g1230 863 PANTHER OS08G0543100 PROTEIN 26 843 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1230 Apr-Chr4 11027139 11029730 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1230 190 386 WRKY Transcription Factor Family AT5G45050 27.404 1.01e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1230 - - aprc:113862174 1431.39