Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1229 ATGGGTGATATTGCTTCTGGAGTGGGCACCATATTATTGGAGAAGCTTGCAACCAAAGCTTATAAGGAGATTATCTTGGCATGGGGTCTCAAAGATGATGTAGAAAGGCTTCAAGAGTCTGTGAAACTCGTCAATGCCCTTCTTTTAGATGCTGAAGAAGACAAGCAATTCAAAGACCAAAGAGTCACCCGATGGTTGCAACTACTTAAACGTGCATTCTATGATGCAAATATCATATTGGATGAAATTGAGTGTGAAGCAAATACAAATAAAGTAATCAAAATCCATGGATGTGTTGCTCAAAAGGTGCGTCAATTTTTCTCATGTTCTAATCCACTTGTATTTCGTGTCAAAATGGCTCACAAAATTAAGGACATAAGAGAAAAGATTGATGAGATTGCACTCAATGGAAACAAGTTCGGTCTCATTCAACGTTCTACAAATGGCATGGCTCTCCATAAAATGTTACCATGGAGGGAGACCCATTCTTCTCTACCTTCACGAATAACAGGTAGAGATGAAGAAAAGGAATATATCATAAGTTTGTTGATGAGTGGACCATCACAATCACAAAGCAAAAATGTTGATGTCATCCCAATTGTTGCAATGGGAGGCTGCGGGAAGACCACACTAGCTCAGTTGGTGTACAACGATTCAAGAATAGCTGATCATTATGATTTAAAATTGTGGGTCCATGTGTCACAAGATTTTGATGTTAAGAGAATAATATCAAAAATTGTTACACAAAAAGATGATACAAAAGGCAAAGGCGGTGAAGACATGACCTTAGAAATGTTGAAAAATCTTCTTCATGAGAAATTATATGAGAAGAAATTTTTACTTGTCCTTGATGACATTTGGAATGAAAATGCTAAAAGATGGCATGATCTACGGGATCTCCTGTTGGATACAATTGGTGAAAGGAACAAAAATGATTGCAAAATCATAGTGACCACTCGCAGTGACAGAGTTGCTGATATTGTGAAGACTGTTACTAAAATCAACTTACAAGTACTCCCAGAAGAGGAATGTTTGCAGTTATTTTTTAAGTGTGCCTTTCAAGAAGAGGGGGAAGCAAATCAACGCCCCAGGCTTCAAGAAATTGGGAAGGAAATTGTTGCAAAGTGCAAAGGGTTGCCACTAGCCATAGTGACTTCAGGGTGCATTCTTAGGTCACAAGAAGATGAAAATGAGTGGAAAAGAATCCGAGATAGCGAGATATGGGAAATAGATCATCAAAAAGATGATGAAATATTACCAGCATTAAGGCTAAGCTATTCTCAATTGCCATCTCCTCTGAAGCAATGTTTTTCTTATTGTGCTCTTTTCCCTAAAGGTCATAAATATTATCCAATAGAATTGATTCCAATTTGGATGGCACAGGGACTCCTCCAACCCACGAATGAAAATGAAGATCCAGAGTGTCTTGGAGAGTTATATTTCAGGCAATTAGTTTCAATGTCCTTCTTTCAATTAGAAGATCAATTCGACTCACCTTTTGGTCAAGAATTTTGGAAACATTTTGGCTATGATTGTTACAAAATGCATGATCTGATCCATGATCTTGCTATGTCGACGTTGCATGGTGAGACTACAGTGATGAGTAGTGCATCTACACATGTCAATGAAAAAGTGCGACATATATCATTTTCAACCATCCCAGACCAATTGCTTTCGCTATCTCTCAAGAGAAGCAAGGTTCAATCATTTGGAAATTGGCACACACAAAGATATATCACCACGACAGAACCATTTGTAAAGTGGATCTTTAAGGAATTCAGTTACTTAAGGTTGTTGGATTTGAAATATTTGGCATTTCAGTTCCTGCCTGATTGCTTCGACAAGATGAAGCATCTGAGATATCTTAATCTGAGTGAATGCTCTGAGTTGAAAAAACTCCCCAACTCCATTTCCAAGCTCTATAATCTCCAGACTTTAATTCTTGTTGGCTGTGACGCACTTGAAGAGTTACCCAAAAACTTGAGGAACCTTATCAACCTTCGAATTTTGATGATTACTGCACAAATCACAAATCTCTGCTTTGTAGATATAAGGTTCTTCAGTTATCTTCAGATTTTAACAATTTTCAGTTGTCATAATTTAGAAGTCATGCCGTGTGATTTATCACATTTGGTTTCTTTGAAGAAGCTGGTAATTATGGGATGTGAAAAGCTAGTTCGTTTTGAAGACGAAGTTGAAAATGAAGGAAGAGGGAAGCAAAATGAAGTTGCCAAGGAAATGAATCTTCAAAGATTTGCTATTGCTGGATCGCCCAAGTTGATCAACTTACCCAACTGGCTTCAAAGATCTGCCAAGACTTTACAACAAATTTGTATTTGGGATACAAGTTTAACAGCATTGCCAGAATGGCTTCCAAATGCAACATCACTTAACAGTCTTTACATTTTAGATTGTGAAGAGTTGTTGTCACTGCCTAAGAATATGGATCAATGTGGAAGCCTTCAAAAGTTAGGAATAAGGGGTTGCCCAAATCTGCGTGAAAGGTACAAAAGGGATGTAGGCCCAGAATGGAGCAAAATAGCTCATGTCCCAAATGTCTATGTAAGTTTCTGTTAA 2577 0.3776 MGDIASGVGTILLEKLATKAYKEIILAWGLKDDVERLQESVKLVNALLLDAEEDKQFKDQRVTRWLQLLKRAFYDANIILDEIECEANTNKVIKIHGCVAQKVRQFFSCSNPLVFRVKMAHKIKDIREKIDEIALNGNKFGLIQRSTNGMALHKMLPWRETHSSLPSRITGRDEEKEYIISLLMSGPSQSQSKNVDVIPIVAMGGCGKTTLAQLVYNDSRIADHYDLKLWVHVSQDFDVKRIISKIVTQKDDTKGKGGEDMTLEMLKNLLHEKLYEKKFLLVLDDIWNENAKRWHDLRDLLLDTIGERNKNDCKIIVTTRSDRVADIVKTVTKINLQVLPEEECLQLFFKCAFQEEGEANQRPRLQEIGKEIVAKCKGLPLAIVTSGCILRSQEDENEWKRIRDSEIWEIDHQKDDEILPALRLSYSQLPSPLKQCFSYCALFPKGHKYYPIELIPIWMAQGLLQPTNENEDPECLGELYFRQLVSMSFFQLEDQFDSPFGQEFWKHFGYDCYKMHDLIHDLAMSTLHGETTVMSSASTHVNEKVRHISFSTIPDQLLSLSLKRSKVQSFGNWHTQRYITTTEPFVKWIFKEFSYLRLLDLKYLAFQFLPDCFDKMKHLRYLNLSECSELKKLPNSISKLYNLQTLILVGCDALEELPKNLRNLINLRILMITAQITNLCFVDIRFFSYLQILTIFSCHNLEVMPCDLSHLVSLKKLVIMGCEKLVRFEDEVENEGRGKQNEVAKEMNLQRFAIAGSPKLINLPNWLQRSAKTLQQICIWDTSLTALPEWLPNATSLNSLYILDCEELLSLPKNMDQCGSLQKLGIRGCPNLRERYKRDVGPEWSKIAHVPNVYVSFC* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1229 858 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 440 IPR027417 -
Apr4g1229 858 Gene3D Ribonuclease Inhibitor 554 739 IPR032675 -
Apr4g1229 858 CDD RX-CC_like 5 134 IPR038005 -
Apr4g1229 858 PANTHER DISEASE RESISTANCE PROTEIN RP 29 835 IPR044974 GO:0006952
Apr4g1229 858 Pfam NB-ARC domain 192 427 IPR002182 GO:0043531
Apr4g1229 858 Gene3D - 338 430 IPR042197 -
Apr4g1229 858 Pfam Rx N-terminal domain 11 98 IPR041118 -
Apr4g1229 858 PRINTS Disease resistance protein signature 197 212 - -
Apr4g1229 858 PRINTS Disease resistance protein signature 273 287 - -
Apr4g1229 858 PRINTS Disease resistance protein signature 376 390 - -
Apr4g1229 858 PRINTS Disease resistance protein signature 614 630 - -
Apr4g1229 858 Gene3D Ribonuclease Inhibitor 741 838 IPR032675 -
Apr4g1229 858 SUPERFAMILY L domain-like 514 833 - -
Apr4g1229 858 Coils Coil 34 54 - -
Apr4g1229 858 Gene3D - 10 124 - -
Apr4g1229 858 Gene3D - 156 335 IPR027417 -
Apr4g1229 858 PANTHER OS08G0543100 PROTEIN 29 835 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1229 Apr-Chr4 10998028 11000604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1229 191 832 WRKY Transcription Factor Family AT5G45050 23.464 1.25e-11 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1229 - - aprc:113862174 1519.6