Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1227 ATGGTGATGACTTGGGAAGATCTGAGTGTGGAAATTGCTACTTCTACTGCTGCTGCTATTACTAGTAGTCTTGGAGCAGCACGCCCTCATAACAAGAAGGTGTTGCTTAATGGGATCACTGGTTTTGCAGAAGCTGGTAGGATCATGGCCATCATGGGTCCTTCTGGCTGTGGCAAAACCATCCTCCTCGACTCATTCGCAGGAAGATATCCTGAAAATGCTGTAGTAACCGGCAACATTTTAATCAACGGGAAAAAGTGCAACCTGCATTGCAAAGAAATGTCTTACATGGCTCAAGAGGAATTTTTCTTAGGAACATTGACTGTGAAAGAGACCCTCACATTCTCTGCAAACATGAGGCTCCCTTCTAAGATGACCAGAGAAGAGATAAATAGAGTTGTTGAAGAAACAATAATGGAAATAGGTCTAGAAGATTGTGCCGATACTAGGATTGGGAATTGGCATTCACGTGGAATAAGTAATGGTGAAAAGAAGAGACTTAGCATTGGCCTTGAGATTCTAACACAACCCTATGTCTTACTTCTTGATGAACCTACTAGTGGACTTGATAGTGCCTCAGCTTTCTATGTGATCCAAGCTCTATACAACATTGCTCATAATGGAAGGATTGTTATGTGTTCGATTCACCAGCCAAGTAATGAAAATTTTAATATGTTTGATGATTTGCTTTTGCTTTCAAGCGGGGAAATTGTTTATTTTGGAGATGCAAAGATGGCTCTAAAGTTTTTTGCCGATGCAGGGTTTCCTTGTCCAACTACAAGAAATCCTTCAGATCATTTCCTTTTATGTATTAATTTGGACTTTGACTCGATTACTGAAGCTCTTGCAAAATCTCATTCCCATCTTTCAAAATCATCAAGTTCAACAGTGGGAATGAGAATAACAGAGATTAGAGGAATCCTCATTGAGAGTTACAACAGTTCAAAGCTAATGATGAAAACAAGAAAAAGAATTCAACAGCTGAAAACCAATGATGAGCATGAAGTTGAGCCAAAGACTGGAAGCAGTACCAAATGGTGGAAGCAACTGTGCACATTGACCCAGCGATCGTTGCTACACATGACTAGGGACATTGGATACTACTGGTTGAGGATAATATTCTACATACTAGCAGCATTCAGTATTGGCACCCTCTTTTTTCATATTGGCACAAACAACTCAATATTGGCTAGAGGCAAGTGTATAACATTCATCTATGGGTTCATGATTTGTTTGTCATGTGGAGGATTACCATTTTTCATTGAAGATTTGAAGGTGTTTTATGGTGAAAGGTCCAAAGGGCATTATGGGGAGGCTGCATTTGTTCTATCCAATATGATATCATCGTTCCCTTTCCATCTTGTTTTATCACTCTTCTCTGGAACAATTATATACCTCATGGTACAATTTCATCCAGGTTTAGCTCATTGCACATTTTTCTTCATCAACTTATTCTGTTGCCTATCTGTTGCGGAGAGCTGTTTCATGATTGTGGCCTCAGTGGTGCCCAATGTCTTGATGGGCTTAGGAACAGGATCAGGTGTAATGGTTTTCATGATGATGCCCTCTCAAATATTCAGACCACTACGTGACATACCAAAGTTCTTTTGGCGTTATCCCATGTCCTACCTCAGTTATGCTTCTTGGGCAGTTCAGGGACAGTACAAGAATGAAATGCTAGGAATTGAATTTGATCCTCTGCTATCTGGGTACCCAAAAGTCTCTGGAGAACAAGTCCTGACAATGGTATATGGGGTTCCATTGAATTATGGCAAATGGTGGGACTTAATAGCTTTGGCCACCTTGTTATTAGTTCATAGGGTGGTTCTTTACTTAGTAATTCGTTATAACAAAAGAATGAAATAA 1866 0.3992 MVMTWEDLSVEIATSTAAAITSSLGAARPHNKKVLLNGITGFAEAGRIMAIMGPSGCGKTILLDSFAGRYPENAVVTGNILINGKKCNLHCKEMSYMAQEEFFLGTLTVKETLTFSANMRLPSKMTREEINRVVEETIMEIGLEDCADTRIGNWHSRGISNGEKKRLSIGLEILTQPYVLLLDEPTSGLDSASAFYVIQALYNIAHNGRIVMCSIHQPSNENFNMFDDLLLLSSGEIVYFGDAKMALKFFADAGFPCPTTRNPSDHFLLCINLDFDSITEALAKSHSHLSKSSSSTVGMRITEIRGILIESYNSSKLMMKTRKRIQQLKTNDEHEVEPKTGSSTKWWKQLCTLTQRSLLHMTRDIGYYWLRIIFYILAAFSIGTLFFHIGTNNSILARGKCITFIYGFMICLSCGGLPFFIEDLKVFYGERSKGHYGEAAFVLSNMISSFPFHLVLSLFSGTIIYLMVQFHPGLAHCTFFFINLFCCLSVAESCFMIVASVVPNVLMGLGTGSGVMVFMMMPSQIFRPLRDIPKFFWRYPMSYLSYASWAVQGQYKNEMLGIEFDPLLSGYPKVSGEQVLTMVYGVPLNYGKWWDLIALATLLLVHRVVLYLVIRYNKRMK* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1227 621 Gene3D - 21 266 IPR027417 -
Apr4g1227 621 Pfam ABC-2 type transporter 216 271 IPR043926 GO:0140359
Apr4g1227 621 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 19 259 IPR003439 GO:0005524
Apr4g1227 621 Pfam ABC transporter 39 187 IPR003439 GO:0005524
Apr4g1227 621 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 249 IPR027417 -
Apr4g1227 621 SMART AAA_5 45 236 IPR003593 -
Apr4g1227 621 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 1 620 - -
Apr4g1227 621 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 620 - -
Apr4g1227 621 Pfam ABC-2 type transporter 349 558 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1227 Apr-Chr4 10977366 10987824 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1227 43 219 Calmodulin-binding Proteins AT2G36910 30.435 8.10e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1227 - K05681 gmx:100802207 944.88