Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1225 ATGGTGTGGGAAGATCTAACAGTTGAATGCTTTGGAACACACAAGAAGAAGCTGCTTACTGGAATCACTGGTTTTGCTGAACCTGGTCGTATTATGGCCGTCATGGGTCCTTCTGGCTGTGGCAAAACCACTCTTCTCAACTCTTTCACTGGAAGACTTCCAACAAATGTTGCAGTAAGCGGGAACATTCTACTCAATGGGAAGAAGAGAAGCTTATATTCCAAAGATGTGTCTTACGTGGCTCAAGAGGAACTTTTCTTAGGAACTTTGACTGTGAAAGAGACCCTCGCATTCTCTGCAAACATGAGGCTCCCTTCTAAGATGACCAAAGAAGAGATAAATAAAGTTGTTGAAGAGACAATAATGCAAATGGGTTTAGAAGATTGTGCAGATAATAAGATTGGGAATTGGCATTCCCGGGGTATAAGTAATGGTGAAAAGAAGAGACTTAGCATTGGCCTTGAAATTCTAACACAGCCCCATGTCTTGCTTCTTGATGAACCTACTAGTGGACTTGATAGTGCCTCAGCTTTTTATGTGATCCAAGCTCTATGCAGCATTGCTCATAATGGAAAACTTGTTATTTGTTCCGTTCACCAACCAAGTAGTGAAACTTTTAATCTCTTTGATGATTTGCTTTTGCTCTCAAGTGGGGAAACTGTTTATTTTGGAGAAGCAAAGATGGCTCTAAATTTTTTTGCTGATGCAGGGTTCCCCTGTCCAACTAGAAGAAATCCTTCCGATCATTTCCTTTTGTGTATGAATTTGGACTTTGATTTTATTACTGCAACATTAGCGAAGACACAAATATGTTTGTCTACATCCAATTCGACAATGGAAATGAGAACATCAGAGATTAGAAGGACACTCATTGGGAGTTACAAAAGTTCAATGCCCATGATTACAAGAAGAATTCAACAACTGAAACCCAATGAAGAGCAACAAATTGAATCCAATGTAAGGAGCAATAGCAGCTGGTGGAGGCAACTGTGTACATTGACCAAACGATCCTTCCTAAACATGACTAGGGATATTGGTTACTACTGGCTGAGGATAATATTCTACATATCTGTAGCAATCAGCATTGGCACCCTCTTTTTTCATGTTGGCACAGATAACTCCTCAATATTGGCTAGAGGAAAGTGTGTCTCATTCATATATGGGTTCATGATTTGTTTGTCATGTGGTGGATTACCATTTTTCATTGAAGAATTGAAGGTGTTCTATGGTGAAAGGTCCAAAGGGCATTATGGAGAGGCTACATTTGTACTATCAAACATCATATCATCATTCCCTTTCCTTGTTCTAATATCGCTCTCCTCTGGAATAATCATTTACTTCATGGTTCAATTTCATCCGGGTTTAACTAATTGTGCATTTTTCTGCATCAACTTATTTTGCTGCCTATCTGTTGTTGAGAGCTGCATCATGGTTGTAGCATCAGTGGTCCCAAATGTGCTAATGGGCATAGGAACAGGAACTGGTGTAATAATCTTCATGATGATGGCCTCCCAAATCTTTAGACCCCTACCTGATATTCCAAAGTTCTTTTGGCGTTATCCCATGTCCTATCTCAGTTTTGCTACTTGGGCAGTGCAGGGACAATACAAGAATGACATGCTTGGGGTTGAATTTGATCCTTTGCTACCTGGGGACCCAAAAGTTTCCGGAGCACAAGTCTTAACATTTGTATTTGGGGTTCCATTGGATCATGACAAATGGTGGGATTTAACAGCATTGTTGACCTTATTGTTAGTCCACAGATTGGCTCTTTACTTAGTGCTTCGGTTTGTGAAAAGACTTAAATCACCTGTGTCATGGTTTTATGCCAAGGAAAGTCTACACTTTGCAGAAAGATGTTTACTCAATAAGAAGCCTTCTATCTCTTCCAAGAAACGAGAGGCTCTACATCCTTTATCGTCTCAAGAGGGTCTTATGTCCCCAAACCTTGCCATATAA 1959 0.4012 MVWEDLTVECFGTHKKKLLTGITGFAEPGRIMAVMGPSGCGKTTLLNSFTGRLPTNVAVSGNILLNGKKRSLYSKDVSYVAQEELFLGTLTVKETLAFSANMRLPSKMTKEEINKVVEETIMQMGLEDCADNKIGNWHSRGISNGEKKRLSIGLEILTQPHVLLLDEPTSGLDSASAFYVIQALCSIAHNGKLVICSVHQPSSETFNLFDDLLLLSSGETVYFGEAKMALNFFADAGFPCPTRRNPSDHFLLCMNLDFDFITATLAKTQICLSTSNSTMEMRTSEIRRTLIGSYKSSMPMITRRIQQLKPNEEQQIESNVRSNSSWWRQLCTLTKRSFLNMTRDIGYYWLRIIFYISVAISIGTLFFHVGTDNSSILARGKCVSFIYGFMICLSCGGLPFFIEELKVFYGERSKGHYGEATFVLSNIISSFPFLVLISLSSGIIIYFMVQFHPGLTNCAFFCINLFCCLSVVESCIMVVASVVPNVLMGIGTGTGVIIFMMMASQIFRPLPDIPKFFWRYPMSYLSFATWAVQGQYKNDMLGVEFDPLLPGDPKVSGAQVLTFVFGVPLDHDKWWDLTALLTLLLVHRLALYLVLRFVKRLKSPVSWFYAKESLHFAERCLLNKKPSISSKKREALHPLSSQEGLMSPNLAI* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1225 652 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 242 IPR003439 GO:0005524
Apr4g1225 652 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 621 - -
Apr4g1225 652 Pfam ABC-2 type transporter 328 534 IPR013525 GO:0016020|GO:0140359
Apr4g1225 652 Pfam ABC transporter 26 170 IPR003439 GO:0005524
Apr4g1225 652 SMART AAA_5 28 219 IPR003593 -
Apr4g1225 652 Pfam ABC-2 type transporter 199 251 IPR043926 GO:0140359
Apr4g1225 652 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 1 621 - -
Apr4g1225 652 Gene3D - 2 233 IPR027417 -
Apr4g1225 652 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 233 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1225 Apr-Chr4 10937762 10944541 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1225 26 203 Calmodulin-binding Proteins AT2G36910 28.877 3.41e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1225 K05681 - gmx:100802207 1066.99