Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1224 ATGGTGTGGGAAGATCTAACAGTTGAATGCTTTGGAACACACAAGAAGAAGCTGCTTAATGGAATCACTGGTTTTGCTGAACCTGGTCGTATTATGGCCGTCATGGGTCCTTCTGGCTGTGGCAAAACCACTCTCCTCAACTCTTTCACTGGAAGACTTCCAACAAATGTTGTAGTAAGCGGCAACATTCTACTCAACGGGAAGAAGAGAAGTTTCTATTCCAAAGATGTGTCTTATGTGGCTCAAGAGGAACTTTTCTTGGGAACTTTGACTGTGAAAGAGACCCTAACATTCTCTGCAAACATGAGGCTCCCTTCTAAGATGACCAAAGAAGAGATAAATAAAGTTGTTGAAGAGACAATAATGCAAATGGGTTTAGAAGATTGTGCAGATAATAAGATTGGGAATTGGCATTCACGGGGTATAAGTAATGGTGAAAAGAAGAGACTTAGCATTGGCCTTGAAATTCTAACACAACCCCATGTCTTGCTTCTTGATGAACCTACTAGTGGACTTGATAGTGCCTCAGCTTTTTATGTTATCCAAGCTCTATGCAACATTGCTTGTAATGAAAAAATTGTTATTTGTTCCGTTCACCAGCCAAGTAGTGAAACTTTTAATCTCTTTGATGATTTGCTTTTGCTCTCAAGTGGGGAAACTGTTTATTTTGGAGAAGTAAAGATGGCTCTAAAGTTTTTTGCTGATGCAGGGTTCCCTTGTCCAATTAGAAGAAATCCTTCAGATCATTTTCTTTTATGTATCAATTTGGACTTTGACTTGATTACTTCAGTACTAGCAAGAACACAATTATGTCTTGTATCTTCATCAAATTCAGCTATGGGAATGAGAACAGCAGATATTAGAGAGAAACTCATTAGGAGTTGTAAAAGTTCAGAGCTAATGATCAATGCAAGAAGAAAAATTCAACAACTGAAACCCAATGAAGGGCATGAAATTGAGCCCAAATTTGGTAGCAATACCACATGGTGGAAGCAACTATGCACATTGACCAAGCGATCTTTCCTAAACATGACTAGGGATATTGGATACTACTGGCTGAGGATAATATTCTACATACTTGTAGCAATCAGTGTTGGCACCCTCTATTTTCATATTGGCACAGACAACAACTCAATATGGGCTAGAGGCATGTGTGTATCATTCATCTATGGGTTCATGAGTTGTTTGTCAGGTGGAGGATTCCCACATTTCATTGAAGAATTGAAGGTGTTTTATGGAGAAAGGTCCAAAGGGCATTATGGGGAGGCTGCATTTGTTCTATCAAATATGATATCATCGTTCCCTTTCATTCTTGTTCAATCTCTCTTCTCTGGAACAATCATATACTACATGGTACAATTTCATCCAGGTTTAGTTCATTGTGCATTTTTCTGCATCAGCTTGTTTTGCTGTCTATCTGTTGCGGAGTGCTGTTTCATGATTGTGGCCTCAATGGTGCCCAATGTCTTGATGGGCTTAGGAACAGGAACTGGTGTATTAATTTTCATGATGATGTCATCCCAATTATTTAGGCCACTACCAGACATTCCAAAGTTTTTTTGGCGCTATCCCATGTCCTACCTCAGTTTTTCTACTTGGGCAGTGCAGGGACAGTACAAGAATGACATGCTGGGGGTTGTATTTGATCCTCTGCTCCCTGGAGACCCGAAAATGACCGGAGAAGAAGTCCTAAAAGTGGTAATTGGGGTTCCATTGGATCATGACAAATGGTGGGACTTAACAGCATTGGTCTTCTTATTATTTTTTCACAGATTGATTCTTTTCTTGGTGCTGCGCTGTAACAAAAGATCAGTGTCACCCGTGTTGTGGTTTTACTTATGTCAAGCAAAGTCAACTCTTCGCAAAAAAATGTTTACTTATTAA 1884 0.3954 MVWEDLTVECFGTHKKKLLNGITGFAEPGRIMAVMGPSGCGKTTLLNSFTGRLPTNVVVSGNILLNGKKRSFYSKDVSYVAQEELFLGTLTVKETLTFSANMRLPSKMTKEEINKVVEETIMQMGLEDCADNKIGNWHSRGISNGEKKRLSIGLEILTQPHVLLLDEPTSGLDSASAFYVIQALCNIACNEKIVICSVHQPSSETFNLFDDLLLLSSGETVYFGEVKMALKFFADAGFPCPIRRNPSDHFLLCINLDFDLITSVLARTQLCLVSSSNSAMGMRTADIREKLIRSCKSSELMINARRKIQQLKPNEGHEIEPKFGSNTTWWKQLCTLTKRSFLNMTRDIGYYWLRIIFYILVAISVGTLYFHIGTDNNSIWARGMCVSFIYGFMSCLSGGGFPHFIEELKVFYGERSKGHYGEAAFVLSNMISSFPFILVQSLFSGTIIYYMVQFHPGLVHCAFFCISLFCCLSVAECCFMIVASMVPNVLMGLGTGTGVLIFMMMSSQLFRPLPDIPKFFWRYPMSYLSFSTWAVQGQYKNDMLGVVFDPLLPGDPKMTGEEVLKVVIGVPLDHDKWWDLTALVFLLFFHRLILFLVLRCNKRSVSPVLWFYLCQAKSTLRKKMFTY* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1224 627 Pfam ABC transporter 21 170 IPR003439 GO:0005524
Apr4g1224 627 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 231 IPR027417 -
Apr4g1224 627 SMART AAA_5 28 227 IPR003593 -
Apr4g1224 627 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 242 IPR003439 GO:0005524
Apr4g1224 627 Pfam ABC-2 type transporter 332 537 IPR013525 GO:0016020|GO:0140359
Apr4g1224 627 Gene3D - 3 234 IPR027417 -
Apr4g1224 627 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 1 616 - -
Apr4g1224 627 Pfam ABC-2 type transporter 199 251 IPR043926 GO:0140359
Apr4g1224 627 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 1 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1224 Apr-Chr4 10920248 10925675 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1224 26 203 Calmodulin-binding Proteins AT2G36910 28.342 1.33e-11 66.2