Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1222 ATGGGAACTGGGTGGAGACAGTTGAAGGTTATGCTTCGTAAGAACTGGCTCCTCAAAATTCGTCATCCTTTTGTAACTGCCGCTGAGATTTTGCTCCCTACGATAGTGTTGTTGCTGTTAGCAGCTGTAAGGACACAAGTGGATACACAAATTCATCCAGCTCAACCGCACATTCAAAAAGACATGTTTGTGGAAGTGGGCCAAGGTATATCCCCTAACTTTCAACAATTTTTGGAATCCTTGTTGGCTAAGGGAGAGTATTTAGCTTTTACACCGGATACCAAGGAAACAAAACTGATGATAGATGTGGTGTCAATAAAATTTCCACTCTTGAAGCTAGTTAGTAGACTATACAAAGATGAGGTAGAGTTGGAAACCTACATCCGATCAGATGCTTATGGTACCTGCAGTCAAGCAAGGAATTGTTCAAATCCCAAAATTAAAGGAGCAGTTGTATTTTATGAACAAGGTCCTCAATCATTTGATTATAGTATACGCCTCAATCATACGTGGGCTTTCTCCGGTTTTCCAGATGTTACAACAATAATGGATACAAATGGCCCTTTTCTCAATGACTTGGAACTTGGTGTTAGTGCTGTACCAACGATGCAATACAGCTTCAGTGGATTTTTGACACTCCAGCAAATGGTTGATTCATTCATAATTTTGACAGCTCAGCAGCCTGACTTAAATCCAAGTGCTGAAGGTGTTGAGCATATTCTTCCAGGCTTATATGATTCTAACTTCTCTTTGAAAAATGCATGGACTCAGTTTAACCCCACTCCCATACGAATAGCTCCATTTCCTACCCGAGAGTACACTGATGACCAGTTCCAGTCAATCATAAAGAAAGTCATGGGAATATTGTACTTACTGGGGTTTCTCTATCCAATTTCTCGTCTGATCAGTTATTCTGTGTTTGAGAAGGAACAAAAGATTAAAGAAGGACTCTATATGATGGGCTTGAAAGATGGTATATTTCATCTTTCTTGGTTTATCACATATGCTTTGCAGTTTGCGATTTCTGCTGGGATCCTAACAGCTTGCACCATGAATAACTTATTCAAGTATAGTGATAAGACACTGGTGTTTGCATACTTTTTCGTTTTTGGGCTTAGTGCAATCATGCTCTCATTTTTTATATCAACGTTTTTCAAACGGGCCAAAACAGCTGTAGCTGTTGGAACTTTGTCTTTTCTTGGTGCCTTTTTCCCCTATTACACTGTCAATGATGAGGGAGTTTCTATGATCTTGAAGGTTGTTGCTTCTTTGCTTTCACCTACTGCCTTTGCTCTGGGTTCAGTCAACTTTGCTGATTATGAACGTGCTCATGTTGGACTTCGTTGGAGCAACATATGGCTGGCATCATCTGGAGTGAACTTTTTGTCATGTCTTATAATGATGATATTTGATACCCTGCTATATTGTGCAATTGGACTTTATTTTGATAAGGTTCTTCCAAGGGAGTATGGACATCGATATCCATGGAGCTTTATTTTCCAAAAGGACTTCTGGAGGAATAAAAAAATAGTAAAAAATTGTTCCTTCAGTCATAAAGTTAAAATATCCTGTAAGAATTCTGAGTCAGAGGGGAATCTTTCAAGGGAATATGCTTCTAAACCTGCCATTGAGGCTATAAGCTTGGACATGAAACAACAGGAGCTTGATGGCAGGTGCATTCAAATCAGGAATTTGCATAAAGTGTATGCTACGAAGAAAGGAGATTGCTGTGCTGTTAACTCATTACGGTTGACACTGTATGAAAATCAGATTCTTGCTCTTCTAGGACATAATGGAGCTGGGAAAAGCACGACAATCTCAATGCTTGTTGGTCTCCTTCCTCCTACTTCTGGGGATGCTTTGGTGTTTGGAAAGAACATTGTATCAGATATTGATGAGATACGGAAAGTTTTGGGTGTCTGCCCACAACATGATATACTCTTTCCCGAATTGACAGTTAGAGAGCATTTAGAACTATTTGCCACATTAAAGGGCGTGGAGGAACACTCATTGGACAGTGTTGTTACCAATATGGCTGATGAGGTGGGCCTGGCTGATAAAATCAACAGTATTGTGAGAGCTCTATCTGGTGGCATGAAGAGGAAATTGTCTCTTGGAATTGCATTGATTGGAAACAGTAAGGTTATAGTTCTTGATGAACCTACTAGTGGAATGGATCCATACTCGATGCGCTTGACATGGCAGTTAATAAAAAAAATTAAGAAGAGCAGGATAATTTTGCTAACTACACATTCTATGGATGAAGCGGATGAGCTAGGTGATCGGATAGCTATCATGGCCAATGGTTCTCTGAAATGCTGTGGAAGCTCCCTTTTCTTGAAGCATCATTATGGAGTTGGTTATACTCTGACTCTTGTGAAGGTTTCTCCTGCTGCTTCTATAGCTGGTGATATAGTGTACCGTCATGTTCCATCAGCAACATGTGTAAGCGAGGTCGGAACTGAGATTTCTTTCAGGCTTCCTGTGGCATCCTCATCAGCCTTTGAGAGGATGTTTAGGGAAATTGAAGGTTGTATGAAAAAACCTGTTTCAAACATGGAATTGAGTGGCGTTAGTGACAAAGATAGTTTTGGTATTGAAAGCTATGGTATATCTGTAACAACTCTGGAGGAGGTGTTCTTGAGAGTTGCAGGATGTGACTATGATGAAGTTGAATGCTTCGAAGAAAATAACCGTTCGCATATATCAGACTCCCTGGCTTCTTTTCCTTCTAATGATTGTCCATCTGGAAAAATAAGTTACCTTAAACTTTTTGGAAATTATAAGAAGATTCTTGGTTTCATGTTTACCATGGTGGGAAGAGCATGTGGTTTAATTTTTGCTACAGTTGTTAGTTTCATCAACTTCTTGGGTGTGCAGTGTTGTAGCTGTTGTTTCATTAATAGGTCAACATTTTGGCAACATTCTAAAGCTTTATTTATTAAAAGGGCAATATCTGCTCGGAGAGATCACAAAACAATTATTTTCCAGCTAATGATTCCTTCTGTCTTCTTGTTTATTGGCCTCCTATTTCTGATGCTCAAGCCCCATCCTGATCAGCAGTCACTGACCCTTTCAACTTCTCATTTTAACCCTCTATTGAGTGGAGGGGGCGGAGGAGGTCCAATTCCATTTAATCTATCTTTTCCAATCGCTGTAAAGGTAGCACAAAATATCAAAGGAGGGTGGATTCAAAAATTCAAGCCAAGCTCATACAGATTTCCTAATTCAGAAAAGGCACTAGCTGATGCAGTTGAAGCAGCAGGGCCAAGTCTGGGACCTGCTCTACTTTCAATGAGTGAATATTTGATGTCTAGCTTTAATGAATCCTACCAATCTAGGTATGGGGCAATTGTGATGGATGATCAGAATAATGATGGAAGCTTAGGCTACACTGTATTACACAACTGTTCTTGTCAACATGCTGGTCCCACATTTATCAATTTGATGAATTCTGCAATTCTTAGACTCGCTACTCATGACATAAATATGACAATTCGGACACGCAACCACCCTTTACCAACAACAAAAAGCCAACGCATTCAACGCCATGACCTGGATGCTTTCTCTGCTGCAATTATTGTGAATATTGCTTTCTCTTTTATACCTGCCTCATTTGCCGTTTCAATTGTTAAGGAACGTGAAGTGAAAGCTAAGCAGCAACAACTAATCAGTGGGGTTTCCATCCTTTCATATTGGGCTTCTACCTTTGTTTGGGACTTTGTGAGCTTCTTGTTTCCAGCTTCTTTTGCCATAGTTCTCTTTTACATCTTTGGTCTGGATCAATTTGTTGGAGGGGTTTCTTTGTTACCAACAATCCTCATGCTTTTGGAATATGGACTAGCAATTGCATCATCAACTTATTGCCTTACATTTTTCTTTTTTGACCATACTATGGCTCAGAACGTGGTTCTCCTGGTCCACTTTTTCACTGGATTGATACTAATGGTTATCTCATTTGTTATGGGACTCATGCCATCCACAATGAGTGCCAATTCTTTTCTTAAGAACTTCTTCAGAATATCTCCTGGATTTTGTTTTGCTGATGGTCTTGCTTCATTAGCTCTTCTGCGGCAAGGAATGAAAGATAAAACAAGTGATGGGGTGTTTGATTGGAATGTTACTGGTGCCTCTATCTGTTATCTTGCTGTTGAGAGCTTTGGTTACTTTTTGTTGACGCTCGCACTTGAAATTTTTCCTTCTCTCAAATTGACTTCATTGATGATCAAGAAGTGGTGTGAAAATATTAATATCTTCCGGCCCGATACTACTTATTTGGAACCTCTGTTAGAACCGTCCTCTGAAACTGTTTCTATGGACCATGATGAAGATGTAGATGTGAAAACAGAAAGAAATAGAGTACTTTCAGGTTCCCTTGACAATTCCATTATCTACTTGCGTAATCTTCGTAAGGTGTATTCTGAGGAGAAGTATCACGGGAAAAAGGTTGCAGTTGATTCATTAACTTTCTCCGTTCAGGAAGGAGAATGTTTTGGCTTTTTAGGAACAAATGGAGCTGGAAAGACCACTACTATTTCTATGCTATGTGGGGAAGAATCTCCTTCTGATGGAACTGCTTTTATTTTTGGCAAAGACATATGCTCCCATCCCAAGGCTGCTCGACAATATATTGGATATTGTCCACAATTTGATGCTTTGTTGGAATACTTAACTGTCCGAGAGCATCTTGAGCTTTATGCTAGAATAAAAGGTGTTCCAGATTATGCAATAGACAATGTTGTTATGGAAAAGTTGTCAGAGTTTGACTTATTGAAGCATGCTAATAAACCATCATTTTCACTTAGTGGAGGGAATAAAAGGAAACTATCAGTTGCAATTGCAATGATTGGAGATCCTCCTATTGTCATTCTTGATGAACCATCCACTGGTATGGATCCCATTGCCAAAAGGTTCATGTGGGATGTGATATCTAGGATCTCAACAAGACGAGGAAAGACTGCTGTAATTCTTACCACTCACAGCATGAATGAAGCTCAAGCTTTATGTACCAGAATAGGGATAATGGTTGGTGGACGATTACGATGCATAGGAAGTCCACAGCATCTTAAAACAAGATTTGGCAATTATCTGGAGCTAGAGGTAAAACCTACTGAAGTGAGTTCTGTGGACTTGCAAACCTTCTGCCAAGCTATTCAGGAAATACTTCTCGATGTCCCTTCTCATCCTAGGAGCTTACTTAATGACCTTGAAATATGCATTGGGGGCACAGACTCCATTACCTCAGGAAATACCTCCATTGCAGAGATTAGTTTGACACGAGAAATGATTGGCTTAATTGGGCGCTGGCTTGACAATGAAGAAAGAGTAAAGACACTAATCTCTTGTACACCTGTCTACGATGGAGCTTCTCAGGAACAGTTATCAGAACAACTTTTACGAGATGGTGGTATTCCATTGCCAGTATTTTCTGAGTGGTGGCTGTCCAAACAAAAATTCTCAGAAATCAATTCATTTATTCTCTCTTCATTTCGTGGAGCAAGATGTCAAGGATGCAATGGTTTGAGTGTCAGATATCAGTTACCATATAGTGAGGACTTTTCCCTGGCAGATGTTTTTGGGCTTCTTGAAGGAAACAGAAATAGATTGGGGATTGCGGAGTACAGCATCAGCCAGTCAACTCTGGAGACAATATTTAATCATTTTGCAGCTAATTCGTGA 5679 0.398 MGTGWRQLKVMLRKNWLLKIRHPFVTAAEILLPTIVLLLLAAVRTQVDTQIHPAQPHIQKDMFVEVGQGISPNFQQFLESLLAKGEYLAFTPDTKETKLMIDVVSIKFPLLKLVSRLYKDEVELETYIRSDAYGTCSQARNCSNPKIKGAVVFYEQGPQSFDYSIRLNHTWAFSGFPDVTTIMDTNGPFLNDLELGVSAVPTMQYSFSGFLTLQQMVDSFIILTAQQPDLNPSAEGVEHILPGLYDSNFSLKNAWTQFNPTPIRIAPFPTREYTDDQFQSIIKKVMGILYLLGFLYPISRLISYSVFEKEQKIKEGLYMMGLKDGIFHLSWFITYALQFAISAGILTACTMNNLFKYSDKTLVFAYFFVFGLSAIMLSFFISTFFKRAKTAVAVGTLSFLGAFFPYYTVNDEGVSMILKVVASLLSPTAFALGSVNFADYERAHVGLRWSNIWLASSGVNFLSCLIMMIFDTLLYCAIGLYFDKVLPREYGHRYPWSFIFQKDFWRNKKIVKNCSFSHKVKISCKNSESEGNLSREYASKPAIEAISLDMKQQELDGRCIQIRNLHKVYATKKGDCCAVNSLRLTLYENQILALLGHNGAGKSTTISMLVGLLPPTSGDALVFGKNIVSDIDEIRKVLGVCPQHDILFPELTVREHLELFATLKGVEEHSLDSVVTNMADEVGLADKINSIVRALSGGMKRKLSLGIALIGNSKVIVLDEPTSGMDPYSMRLTWQLIKKIKKSRIILLTTHSMDEADELGDRIAIMANGSLKCCGSSLFLKHHYGVGYTLTLVKVSPAASIAGDIVYRHVPSATCVSEVGTEISFRLPVASSSAFERMFREIEGCMKKPVSNMELSGVSDKDSFGIESYGISVTTLEEVFLRVAGCDYDEVECFEENNRSHISDSLASFPSNDCPSGKISYLKLFGNYKKILGFMFTMVGRACGLIFATVVSFINFLGVQCCSCCFINRSTFWQHSKALFIKRAISARRDHKTIIFQLMIPSVFLFIGLLFLMLKPHPDQQSLTLSTSHFNPLLSGGGGGGPIPFNLSFPIAVKVAQNIKGGWIQKFKPSSYRFPNSEKALADAVEAAGPSLGPALLSMSEYLMSSFNESYQSRYGAIVMDDQNNDGSLGYTVLHNCSCQHAGPTFINLMNSAILRLATHDINMTIRTRNHPLPTTKSQRIQRHDLDAFSAAIIVNIAFSFIPASFAVSIVKEREVKAKQQQLISGVSILSYWASTFVWDFVSFLFPASFAIVLFYIFGLDQFVGGVSLLPTILMLLEYGLAIASSTYCLTFFFFDHTMAQNVVLLVHFFTGLILMVISFVMGLMPSTMSANSFLKNFFRISPGFCFADGLASLALLRQGMKDKTSDGVFDWNVTGASICYLAVESFGYFLLTLALEIFPSLKLTSLMIKKWCENINIFRPDTTYLEPLLEPSSETVSMDHDEDVDVKTERNRVLSGSLDNSIIYLRNLRKVYSEEKYHGKKVAVDSLTFSVQEGECFGFLGTNGAGKTTTISMLCGEESPSDGTAFIFGKDICSHPKAARQYIGYCPQFDALLEYLTVREHLELYARIKGVPDYAIDNVVMEKLSEFDLLKHANKPSFSLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWDVISRISTRRGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLKTRFGNYLELEVKPTEVSSVDLQTFCQAIQEILLDVPSHPRSLLNDLEICIGGTDSITSGNTSIAEISLTREMIGLIGRWLDNEERVKTLISCTPVYDGASQEQLSEQLLRDGGIPLPVFSEWWLSKQKFSEINSFILSSFRGARCQGCNGLSVRYQLPYSEDFSLADVFGLLEGNRNRLGIAEYSISQSTLETIFNHFAANS* 1893
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1222 1892 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1463 1694 IPR027417 -
Apr4g1222 1892 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 560 779 IPR027417 -
Apr4g1222 1892 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1320 1662 IPR026082 GO:0016021|GO:0055085|GO:0140359
Apr4g1222 1892 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1656 1889 IPR026082 GO:0016021|GO:0055085|GO:0140359
Apr4g1222 1892 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 5 1318 IPR026082 GO:0016021|GO:0055085|GO:0140359
Apr4g1222 1892 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1464 1702 IPR003439 GO:0005524
Apr4g1222 1892 CDD ABC_subfamily_A 1464 1690 - -
Apr4g1222 1892 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 1656 1889 - -
Apr4g1222 1892 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 5 1318 - -
Apr4g1222 1892 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 1320 1662 - -
Apr4g1222 1892 SMART AAA_5 1494 1681 IPR003593 -
Apr4g1222 1892 SMART AAA_5 588 770 IPR003593 -
Apr4g1222 1892 CDD ABC_subfamily_A 560 781 - -
Apr4g1222 1892 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 560 793 IPR003439 GO:0005524
Apr4g1222 1892 Pfam ABC transporter 1486 1628 IPR003439 GO:0005524
Apr4g1222 1892 Pfam ABC transporter 580 723 IPR003439 GO:0005524
Apr4g1222 1892 Pfam ABC-2 family transporter protein 249 480 - -
Apr4g1222 1892 Pfam ABC-2 family transporter protein 992 1394 - -
Apr4g1222 1892 Gene3D - 547 793 IPR027417 -
Apr4g1222 1892 Gene3D - 1456 1704 IPR027417 -
Apr4g1222 1892 ProSitePatterns ABC transporters family signature. 1601 1615 IPR017871 GO:0005524
Apr4g1222 1892 ProSitePatterns ABC transporters family signature. 695 709 IPR017871 GO:0005524
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Apr4g1222 Apr-Chr4 10860528 10904836 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1222 540 799 Calmodulin-binding Proteins AT2G36910 25.556 2.98e-15 80.1
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1222 4 10860528 10904836 Apr4g1222 4 10860528 10904836 ECH