Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr4g1222 | ATGGGAACTGGGTGGAGACAGTTGAAGGTTATGCTTCGTAAGAACTGGCTCCTCAAAATTCGTCATCCTTTTGTAACTGCCGCTGAGATTTTGCTCCCTACGATAGTGTTGTTGCTGTTAGCAGCTGTAAGGACACAAGTGGATACACAAATTCATCCAGCTCAACCGCACATTCAAAAAGACATGTTTGTGGAAGTGGGCCAAGGTATATCCCCTAACTTTCAACAATTTTTGGAATCCTTGTTGGCTAAGGGAGAGTATTTAGCTTTTACACCGGATACCAAGGAAACAAAACTGATGATAGATGTGGTGTCAATAAAATTTCCACTCTTGAAGCTAGTTAGTAGACTATACAAAGATGAGGTAGAGTTGGAAACCTACATCCGATCAGATGCTTATGGTACCTGCAGTCAAGCAAGGAATTGTTCAAATCCCAAAATTAAAGGAGCAGTTGTATTTTATGAACAAGGTCCTCAATCATTTGATTATAGTATACGCCTCAATCATACGTGGGCTTTCTCCGGTTTTCCAGATGTTACAACAATAATGGATACAAATGGCCCTTTTCTCAATGACTTGGAACTTGGTGTTAGTGCTGTACCAACGATGCAATACAGCTTCAGTGGATTTTTGACACTCCAGCAAATGGTTGATTCATTCATAATTTTGACAGCTCAGCAGCCTGACTTAAATCCAAGTGCTGAAGGTGTTGAGCATATTCTTCCAGGCTTATATGATTCTAACTTCTCTTTGAAAAATGCATGGACTCAGTTTAACCCCACTCCCATACGAATAGCTCCATTTCCTACCCGAGAGTACACTGATGACCAGTTCCAGTCAATCATAAAGAAAGTCATGGGAATATTGTACTTACTGGGGTTTCTCTATCCAATTTCTCGTCTGATCAGTTATTCTGTGTTTGAGAAGGAACAAAAGATTAAAGAAGGACTCTATATGATGGGCTTGAAAGATGGTATATTTCATCTTTCTTGGTTTATCACATATGCTTTGCAGTTTGCGATTTCTGCTGGGATCCTAACAGCTTGCACCATGAATAACTTATTCAAGTATAGTGATAAGACACTGGTGTTTGCATACTTTTTCGTTTTTGGGCTTAGTGCAATCATGCTCTCATTTTTTATATCAACGTTTTTCAAACGGGCCAAAACAGCTGTAGCTGTTGGAACTTTGTCTTTTCTTGGTGCCTTTTTCCCCTATTACACTGTCAATGATGAGGGAGTTTCTATGATCTTGAAGGTTGTTGCTTCTTTGCTTTCACCTACTGCCTTTGCTCTGGGTTCAGTCAACTTTGCTGATTATGAACGTGCTCATGTTGGACTTCGTTGGAGCAACATATGGCTGGCATCATCTGGAGTGAACTTTTTGTCATGTCTTATAATGATGATATTTGATACCCTGCTATATTGTGCAATTGGACTTTATTTTGATAAGGTTCTTCCAAGGGAGTATGGACATCGATATCCATGGAGCTTTATTTTCCAAAAGGACTTCTGGAGGAATAAAAAAATAGTAAAAAATTGTTCCTTCAGTCATAAAGTTAAAATATCCTGTAAGAATTCTGAGTCAGAGGGGAATCTTTCAAGGGAATATGCTTCTAAACCTGCCATTGAGGCTATAAGCTTGGACATGAAACAACAGGAGCTTGATGGCAGGTGCATTCAAATCAGGAATTTGCATAAAGTGTATGCTACGAAGAAAGGAGATTGCTGTGCTGTTAACTCATTACGGTTGACACTGTATGAAAATCAGATTCTTGCTCTTCTAGGACATAATGGAGCTGGGAAAAGCACGACAATCTCAATGCTTGTTGGTCTCCTTCCTCCTACTTCTGGGGATGCTTTGGTGTTTGGAAAGAACATTGTATCAGATATTGATGAGATACGGAAAGTTTTGGGTGTCTGCCCACAACATGATATACTCTTTCCCGAATTGACAGTTAGAGAGCATTTAGAACTATTTGCCACATTAAAGGGCGTGGAGGAACACTCATTGGACAGTGTTGTTACCAATATGGCTGATGAGGTGGGCCTGGCTGATAAAATCAACAGTATTGTGAGAGCTCTATCTGGTGGCATGAAGAGGAAATTGTCTCTTGGAATTGCATTGATTGGAAACAGTAAGGTTATAGTTCTTGATGAACCTACTAGTGGAATGGATCCATACTCGATGCGCTTGACATGGCAGTTAATAAAAAAAATTAAGAAGAGCAGGATAATTTTGCTAACTACACATTCTATGGATGAAGCGGATGAGCTAGGTGATCGGATAGCTATCATGGCCAATGGTTCTCTGAAATGCTGTGGAAGCTCCCTTTTCTTGAAGCATCATTATGGAGTTGGTTATACTCTGACTCTTGTGAAGGTTTCTCCTGCTGCTTCTATAGCTGGTGATATAGTGTACCGTCATGTTCCATCAGCAACATGTGTAAGCGAGGTCGGAACTGAGATTTCTTTCAGGCTTCCTGTGGCATCCTCATCAGCCTTTGAGAGGATGTTTAGGGAAATTGAAGGTTGTATGAAAAAACCTGTTTCAAACATGGAATTGAGTGGCGTTAGTGACAAAGATAGTTTTGGTATTGAAAGCTATGGTATATCTGTAACAACTCTGGAGGAGGTGTTCTTGAGAGTTGCAGGATGTGACTATGATGAAGTTGAATGCTTCGAAGAAAATAACCGTTCGCATATATCAGACTCCCTGGCTTCTTTTCCTTCTAATGATTGTCCATCTGGAAAAATAAGTTACCTTAAACTTTTTGGAAATTATAAGAAGATTCTTGGTTTCATGTTTACCATGGTGGGAAGAGCATGTGGTTTAATTTTTGCTACAGTTGTTAGTTTCATCAACTTCTTGGGTGTGCAGTGTTGTAGCTGTTGTTTCATTAATAGGTCAACATTTTGGCAACATTCTAAAGCTTTATTTATTAAAAGGGCAATATCTGCTCGGAGAGATCACAAAACAATTATTTTCCAGCTAATGATTCCTTCTGTCTTCTTGTTTATTGGCCTCCTATTTCTGATGCTCAAGCCCCATCCTGATCAGCAGTCACTGACCCTTTCAACTTCTCATTTTAACCCTCTATTGAGTGGAGGGGGCGGAGGAGGTCCAATTCCATTTAATCTATCTTTTCCAATCGCTGTAAAGGTAGCACAAAATATCAAAGGAGGGTGGATTCAAAAATTCAAGCCAAGCTCATACAGATTTCCTAATTCAGAAAAGGCACTAGCTGATGCAGTTGAAGCAGCAGGGCCAAGTCTGGGACCTGCTCTACTTTCAATGAGTGAATATTTGATGTCTAGCTTTAATGAATCCTACCAATCTAGGTATGGGGCAATTGTGATGGATGATCAGAATAATGATGGAAGCTTAGGCTACACTGTATTACACAACTGTTCTTGTCAACATGCTGGTCCCACATTTATCAATTTGATGAATTCTGCAATTCTTAGACTCGCTACTCATGACATAAATATGACAATTCGGACACGCAACCACCCTTTACCAACAACAAAAAGCCAACGCATTCAACGCCATGACCTGGATGCTTTCTCTGCTGCAATTATTGTGAATATTGCTTTCTCTTTTATACCTGCCTCATTTGCCGTTTCAATTGTTAAGGAACGTGAAGTGAAAGCTAAGCAGCAACAACTAATCAGTGGGGTTTCCATCCTTTCATATTGGGCTTCTACCTTTGTTTGGGACTTTGTGAGCTTCTTGTTTCCAGCTTCTTTTGCCATAGTTCTCTTTTACATCTTTGGTCTGGATCAATTTGTTGGAGGGGTTTCTTTGTTACCAACAATCCTCATGCTTTTGGAATATGGACTAGCAATTGCATCATCAACTTATTGCCTTACATTTTTCTTTTTTGACCATACTATGGCTCAGAACGTGGTTCTCCTGGTCCACTTTTTCACTGGATTGATACTAATGGTTATCTCATTTGTTATGGGACTCATGCCATCCACAATGAGTGCCAATTCTTTTCTTAAGAACTTCTTCAGAATATCTCCTGGATTTTGTTTTGCTGATGGTCTTGCTTCATTAGCTCTTCTGCGGCAAGGAATGAAAGATAAAACAAGTGATGGGGTGTTTGATTGGAATGTTACTGGTGCCTCTATCTGTTATCTTGCTGTTGAGAGCTTTGGTTACTTTTTGTTGACGCTCGCACTTGAAATTTTTCCTTCTCTCAAATTGACTTCATTGATGATCAAGAAGTGGTGTGAAAATATTAATATCTTCCGGCCCGATACTACTTATTTGGAACCTCTGTTAGAACCGTCCTCTGAAACTGTTTCTATGGACCATGATGAAGATGTAGATGTGAAAACAGAAAGAAATAGAGTACTTTCAGGTTCCCTTGACAATTCCATTATCTACTTGCGTAATCTTCGTAAGGTGTATTCTGAGGAGAAGTATCACGGGAAAAAGGTTGCAGTTGATTCATTAACTTTCTCCGTTCAGGAAGGAGAATGTTTTGGCTTTTTAGGAACAAATGGAGCTGGAAAGACCACTACTATTTCTATGCTATGTGGGGAAGAATCTCCTTCTGATGGAACTGCTTTTATTTTTGGCAAAGACATATGCTCCCATCCCAAGGCTGCTCGACAATATATTGGATATTGTCCACAATTTGATGCTTTGTTGGAATACTTAACTGTCCGAGAGCATCTTGAGCTTTATGCTAGAATAAAAGGTGTTCCAGATTATGCAATAGACAATGTTGTTATGGAAAAGTTGTCAGAGTTTGACTTATTGAAGCATGCTAATAAACCATCATTTTCACTTAGTGGAGGGAATAAAAGGAAACTATCAGTTGCAATTGCAATGATTGGAGATCCTCCTATTGTCATTCTTGATGAACCATCCACTGGTATGGATCCCATTGCCAAAAGGTTCATGTGGGATGTGATATCTAGGATCTCAACAAGACGAGGAAAGACTGCTGTAATTCTTACCACTCACAGCATGAATGAAGCTCAAGCTTTATGTACCAGAATAGGGATAATGGTTGGTGGACGATTACGATGCATAGGAAGTCCACAGCATCTTAAAACAAGATTTGGCAATTATCTGGAGCTAGAGGTAAAACCTACTGAAGTGAGTTCTGTGGACTTGCAAACCTTCTGCCAAGCTATTCAGGAAATACTTCTCGATGTCCCTTCTCATCCTAGGAGCTTACTTAATGACCTTGAAATATGCATTGGGGGCACAGACTCCATTACCTCAGGAAATACCTCCATTGCAGAGATTAGTTTGACACGAGAAATGATTGGCTTAATTGGGCGCTGGCTTGACAATGAAGAAAGAGTAAAGACACTAATCTCTTGTACACCTGTCTACGATGGAGCTTCTCAGGAACAGTTATCAGAACAACTTTTACGAGATGGTGGTATTCCATTGCCAGTATTTTCTGAGTGGTGGCTGTCCAAACAAAAATTCTCAGAAATCAATTCATTTATTCTCTCTTCATTTCGTGGAGCAAGATGTCAAGGATGCAATGGTTTGAGTGTCAGATATCAGTTACCATATAGTGAGGACTTTTCCCTGGCAGATGTTTTTGGGCTTCTTGAAGGAAACAGAAATAGATTGGGGATTGCGGAGTACAGCATCAGCCAGTCAACTCTGGAGACAATATTTAATCATTTTGCAGCTAATTCGTGA | 5679 | 0.398 | MGTGWRQLKVMLRKNWLLKIRHPFVTAAEILLPTIVLLLLAAVRTQVDTQIHPAQPHIQKDMFVEVGQGISPNFQQFLESLLAKGEYLAFTPDTKETKLMIDVVSIKFPLLKLVSRLYKDEVELETYIRSDAYGTCSQARNCSNPKIKGAVVFYEQGPQSFDYSIRLNHTWAFSGFPDVTTIMDTNGPFLNDLELGVSAVPTMQYSFSGFLTLQQMVDSFIILTAQQPDLNPSAEGVEHILPGLYDSNFSLKNAWTQFNPTPIRIAPFPTREYTDDQFQSIIKKVMGILYLLGFLYPISRLISYSVFEKEQKIKEGLYMMGLKDGIFHLSWFITYALQFAISAGILTACTMNNLFKYSDKTLVFAYFFVFGLSAIMLSFFISTFFKRAKTAVAVGTLSFLGAFFPYYTVNDEGVSMILKVVASLLSPTAFALGSVNFADYERAHVGLRWSNIWLASSGVNFLSCLIMMIFDTLLYCAIGLYFDKVLPREYGHRYPWSFIFQKDFWRNKKIVKNCSFSHKVKISCKNSESEGNLSREYASKPAIEAISLDMKQQELDGRCIQIRNLHKVYATKKGDCCAVNSLRLTLYENQILALLGHNGAGKSTTISMLVGLLPPTSGDALVFGKNIVSDIDEIRKVLGVCPQHDILFPELTVREHLELFATLKGVEEHSLDSVVTNMADEVGLADKINSIVRALSGGMKRKLSLGIALIGNSKVIVLDEPTSGMDPYSMRLTWQLIKKIKKSRIILLTTHSMDEADELGDRIAIMANGSLKCCGSSLFLKHHYGVGYTLTLVKVSPAASIAGDIVYRHVPSATCVSEVGTEISFRLPVASSSAFERMFREIEGCMKKPVSNMELSGVSDKDSFGIESYGISVTTLEEVFLRVAGCDYDEVECFEENNRSHISDSLASFPSNDCPSGKISYLKLFGNYKKILGFMFTMVGRACGLIFATVVSFINFLGVQCCSCCFINRSTFWQHSKALFIKRAISARRDHKTIIFQLMIPSVFLFIGLLFLMLKPHPDQQSLTLSTSHFNPLLSGGGGGGPIPFNLSFPIAVKVAQNIKGGWIQKFKPSSYRFPNSEKALADAVEAAGPSLGPALLSMSEYLMSSFNESYQSRYGAIVMDDQNNDGSLGYTVLHNCSCQHAGPTFINLMNSAILRLATHDINMTIRTRNHPLPTTKSQRIQRHDLDAFSAAIIVNIAFSFIPASFAVSIVKEREVKAKQQQLISGVSILSYWASTFVWDFVSFLFPASFAIVLFYIFGLDQFVGGVSLLPTILMLLEYGLAIASSTYCLTFFFFDHTMAQNVVLLVHFFTGLILMVISFVMGLMPSTMSANSFLKNFFRISPGFCFADGLASLALLRQGMKDKTSDGVFDWNVTGASICYLAVESFGYFLLTLALEIFPSLKLTSLMIKKWCENINIFRPDTTYLEPLLEPSSETVSMDHDEDVDVKTERNRVLSGSLDNSIIYLRNLRKVYSEEKYHGKKVAVDSLTFSVQEGECFGFLGTNGAGKTTTISMLCGEESPSDGTAFIFGKDICSHPKAARQYIGYCPQFDALLEYLTVREHLELYARIKGVPDYAIDNVVMEKLSEFDLLKHANKPSFSLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWDVISRISTRRGKTAVILTTHSMNEAQALCTRIGIMVGGRLRCIGSPQHLKTRFGNYLELEVKPTEVSSVDLQTFCQAIQEILLDVPSHPRSLLNDLEICIGGTDSITSGNTSIAEISLTREMIGLIGRWLDNEERVKTLISCTPVYDGASQEQLSEQLLRDGGIPLPVFSEWWLSKQKFSEINSFILSSFRGARCQGCNGLSVRYQLPYSEDFSLADVFGLLEGNRNRLGIAEYSISQSTLETIFNHFAANS* | 1893 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr4g1222 | 1892 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1463 | 1694 | IPR027417 | - | |
Apr4g1222 | 1892 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 560 | 779 | IPR027417 | - | |
Apr4g1222 | 1892 | PANTHER | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA | 1320 | 1662 | IPR026082 | GO:0016021|GO:0055085|GO:0140359 | |
Apr4g1222 | 1892 | PANTHER | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA | 1656 | 1889 | IPR026082 | GO:0016021|GO:0055085|GO:0140359 | |
Apr4g1222 | 1892 | PANTHER | ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA | 5 | 1318 | IPR026082 | GO:0016021|GO:0055085|GO:0140359 | |
Apr4g1222 | 1892 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1464 | 1702 | IPR003439 | GO:0005524 | |
Apr4g1222 | 1892 | CDD | ABC_subfamily_A | 1464 | 1690 | - | - | |
Apr4g1222 | 1892 | PANTHER | ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B | 1656 | 1889 | - | - | |
Apr4g1222 | 1892 | PANTHER | ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B | 5 | 1318 | - | - | |
Apr4g1222 | 1892 | PANTHER | ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B | 1320 | 1662 | - | - | |
Apr4g1222 | 1892 | SMART | AAA_5 | 1494 | 1681 | IPR003593 | - | |
Apr4g1222 | 1892 | SMART | AAA_5 | 588 | 770 | IPR003593 | - | |
Apr4g1222 | 1892 | CDD | ABC_subfamily_A | 560 | 781 | - | - | |
Apr4g1222 | 1892 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 560 | 793 | IPR003439 | GO:0005524 | |
Apr4g1222 | 1892 | Pfam | ABC transporter | 1486 | 1628 | IPR003439 | GO:0005524 | |
Apr4g1222 | 1892 | Pfam | ABC transporter | 580 | 723 | IPR003439 | GO:0005524 | |
Apr4g1222 | 1892 | Pfam | ABC-2 family transporter protein | 249 | 480 | - | - | |
Apr4g1222 | 1892 | Pfam | ABC-2 family transporter protein | 992 | 1394 | - | - | |
Apr4g1222 | 1892 | Gene3D | - | 547 | 793 | IPR027417 | - | |
Apr4g1222 | 1892 | Gene3D | - | 1456 | 1704 | IPR027417 | - | |
Apr4g1222 | 1892 | ProSitePatterns | ABC transporters family signature. | 1601 | 1615 | IPR017871 | GO:0005524 | |
Apr4g1222 | 1892 | ProSitePatterns | ABC transporters family signature. | 695 | 709 | IPR017871 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr4g1222 | Apr-Chr4 | 10860528 | 10904836 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr4g1222 | 540 | 799 | Calmodulin-binding Proteins | AT2G36910 | 25.556 | 2.98e-15 | 80.1 |