Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1214 ATGAACATGGCCGAATTTTTCGTCTTCGATATTGCAGAATCACTGCTATGTAAGCTTGCTTCTCACGCTTATGAAGAAGCTTCTCGAGCCTATCATGTGTATGAGGATTTTCAAGGGATCAAAGACACTTTGTCAATTGTGAAAGGTGTACTATTGGATGCTGAGGAGAAGAAGGAACAGAAGAATGGCTTGCGTGAATGGCTGAGGCAGTATCAATGCGTCTGCTACTATGCTGAAGATGTAGTTGATGAATTTGATTGCCAAACATTGCGAAAGCAAGTTGTGAAAGCTTCTGGCAGCATCAAGATGAAGGTAGGACACTTCTTTTCTTTGTCCAATCCTCTTATTTTCCGTCATAGGATGGCTCGTCAAATCAAAGATGTTAAGGATAGATTGAATAAGATAGCAGCTGATGGGAACAAGTTTGGCCTTGAGAGGATTGATGTTGACCAAAGAGTTCTGCAAAGGAGAGAAATGACTTATTCCTATGTCGATGCTTCTGGTGTGTTAGGAAGGGAGAATGATAGGGAAGAAATCATCAAGCTTTTGTTGCAACCTCTCCCTGATGGTGGCTGTGATCAAAGCCTGTGTGTTATTCCCATAGTTGGAATTGGTGGCTTGGGGAAGACCACACTTGCGAAGTTGGTGTTCAATGATAGGAGGATGGATGAAGTTTTTCAATTGAAGATGTGGGTCTGTGTCTCTGATGATTTTGATATTAGGCAGATCATTGTTAAAATCATCAACTCTGCTTCTGCTTCTGCTTCTGCTTCAGCTCCAACAATTGCTCTTGGTCTCAAAGAAAATGTCAACCACTTAGACATTGAGCAGCTACAGAGAATTCTCAGATATAAACTTTTTGGTCATAAGTTTTTACTCGTCTTAGATGATATATGGAATAATGATCGTACAAAATGGATAGAGTTGAAAGACTTGATAAATACTGGAGCTGTGGGAAGCAAGGTCTTGGTGACAACACGTAGTAACTCAATTGCTTCAATGATGGGCACTGTTCCCTCCTACAATTTAGCAGGCCTTTCTCTGGAGAATTGTTTATCTCTGTTTGTCAAATGGGCATTCAAGGAAGGCGAAGAAAATAAATATACAAATCTAGTGGAGATTGGAAAGGATATTGTGAAAAAATGTCGAGGGGTTCCATTGGCAGTAAGAACATTAGGAAGTTCCCTGTTCTCAAATTTTTCGTTAGATAGTTGGGAGTTTGTAAGAAACCATGAAATTTGGAACTTAAAACAAAAGAAAGATGACATTTTACCGGCCCTTAAGTTGAGCTATGATCAAATGCCATCCAATTTGAGGCACTGTTTTGCTATGTTTTCTCTTTTCCCTAAAGATTTTGGCTTTAGTACTCGTAAATTATTTAATATTTGGCTGGTATTTGGATTGCTTCAATCTCCAGATGGAAGTCAAAATCTAGAGAATGTTGCAAGACAGTATATTGCCGAGTTACATTCAAGATCATTTCTTGAGGATTTTGATGACTTTGGTCACTTGGACTATTTCAAAGTACATGATTTGGTACATGATCTTGCACTGTATGTTGCGAAACCAGAGTTTCTTGTGATAAACTCCCACACTCGCAATATACCTGAGCAAGCAAGGTATTTGTCAATTGTTGAAAATGTTCCACTTAGCCCTGCTTTGTTCCCCAAGTCCAGAACTGTGAGAACTATGTTATTTCCCGTCGATGGAATAGGTGTTGACTGTGAAGCTCTATTGCATACATGGATAACAAGATACAAATACTTACGGCTTTTAGATTTAAGTGATTCTTCATTTGAGACCCTGCCTAATTCAATTGCTGAATTGGAGCATCTGCAAGGCATCGATCTATCAAATAATTGCAAAATAAAAAGACTTCCTCATTCTCTTTGCAAACTACAAAATTGGAAACTTTTGTCAGTCAGAGGATGCGTGAATCTTGAAAAATTGCCTAAAGGGTTAGGGAAGTTAATCAGCCTTCAACATTTGTATATAACCACAAAACAATCGGTTCTGCCACAGAATGAATTCGCAAGCTTGTGCAATCTGCAAACTTTGAGTTTTGAATATTGTGACAAATTGAACTTTTTGTTCAGAGGGGTACAACTCCCTTCCCTTGAAATTTTGCTTGTTCAATCATGTGGGAGCCTAGAGTCCTTACCTTTTTATATTCTTCCTGAATTAGAGGTTCTACTAGTAATGCGGTGCGATAAGCTAAATCTATCGTTGACCTATGAAACCCCAATCCAAAAGTTAAGGATGAAATTTCTGCATCTTGAGCATTTTCCAAGGCAAATGACACTGCCAGAATGGATTCAAGGAGCAACTGGCACTTTACAGACATTATTAATTTTAGATTTTCCTAATCTTAAGATGCTTCCTGAATGGCTGACAAGAATGGCTCGTCTTAAAACACTCCATATTGTGAACTGTCCTCAATTGTTATATCTCCCAAGTGACATGCCTCACCTCACTGCTCTTGAAGATTTGACCATAGATGGTTGCCCTGAGTTGTGTCAAAAATGTCAACCCCATTCTGTTGAGTACTGGCCCTTGATTGCTCACATCAAACACGTTTCCATTGCAGATCCAAGACAGGAGGGGAAACTCGTTTATCGAATGCAATCGCGGCTGCGGTTGAATTTGCGCGGACGTTTTGATCTTTTACTGGTTTTTCGGTTACCATAA 2688 0.3932 MNMAEFFVFDIAESLLCKLASHAYEEASRAYHVYEDFQGIKDTLSIVKGVLLDAEEKKEQKNGLREWLRQYQCVCYYAEDVVDEFDCQTLRKQVVKASGSIKMKVGHFFSLSNPLIFRHRMARQIKDVKDRLNKIAADGNKFGLERIDVDQRVLQRREMTYSYVDASGVLGRENDREEIIKLLLQPLPDGGCDQSLCVIPIVGIGGLGKTTLAKLVFNDRRMDEVFQLKMWVCVSDDFDIRQIIVKIINSASASASASAPTIALGLKENVNHLDIEQLQRILRYKLFGHKFLLVLDDIWNNDRTKWIELKDLINTGAVGSKVLVTTRSNSIASMMGTVPSYNLAGLSLENCLSLFVKWAFKEGEENKYTNLVEIGKDIVKKCRGVPLAVRTLGSSLFSNFSLDSWEFVRNHEIWNLKQKKDDILPALKLSYDQMPSNLRHCFAMFSLFPKDFGFSTRKLFNIWLVFGLLQSPDGSQNLENVARQYIAELHSRSFLEDFDDFGHLDYFKVHDLVHDLALYVAKPEFLVINSHTRNIPEQARYLSIVENVPLSPALFPKSRTVRTMLFPVDGIGVDCEALLHTWITRYKYLRLLDLSDSSFETLPNSIAELEHLQGIDLSNNCKIKRLPHSLCKLQNWKLLSVRGCVNLEKLPKGLGKLISLQHLYITTKQSVLPQNEFASLCNLQTLSFEYCDKLNFLFRGVQLPSLEILLVQSCGSLESLPFYILPELEVLLVMRCDKLNLSLTYETPIQKLRMKFLHLEHFPRQMTLPEWIQGATGTLQTLLILDFPNLKMLPEWLTRMARLKTLHIVNCPQLLYLPSDMPHLTALEDLTIDGCPELCQKCQPHSVEYWPLIAHIKHVSIADPRQEGKLVYRMQSRLRLNLRGRFDLLLVFRLP* 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1214 895 Gene3D - 12 132 - -
Apr4g1214 895 Gene3D - 150 338 IPR027417 -
Apr4g1214 895 Gene3D - 345 429 IPR042197 -
Apr4g1214 895 Gene3D - 430 519 IPR036388 -
Apr4g1214 895 Gene3D Ribonuclease Inhibitor 545 866 IPR032675 -
Apr4g1214 895 Pfam Rx N-terminal domain 13 96 IPR041118 -
Apr4g1214 895 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 444 IPR027417 -
Apr4g1214 895 SUPERFAMILY L domain-like 508 853 - -
Apr4g1214 895 CDD RX-CC_like 4 136 IPR038005 -
Apr4g1214 895 PRINTS Disease resistance protein signature 198 213 - -
Apr4g1214 895 PRINTS Disease resistance protein signature 285 299 - -
Apr4g1214 895 PRINTS Disease resistance protein signature 382 396 - -
Apr4g1214 895 PRINTS Disease resistance protein signature 701 717 - -
Apr4g1214 895 PANTHER DISEASE RESISTANCE PROTEIN RP 8 785 IPR044974 GO:0006952
Apr4g1214 895 Pfam NB-ARC domain 189 432 IPR002182 GO:0043531
Apr4g1214 895 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 8 785 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1214 Apr-Chr4 10731574 10735141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1214 199 838 WRKY Transcription Factor Family AT5G45050 21.418 1.62e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1214 - - gmx:100794422 1293.1