Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1212 ATGAACATGGCCGAATTTTTCGTCTTCGATATTGCAGAATCACTGCTACGTAAGCTTGCTTCTCACGTTTATGAAGAAGCTTCTCGAGCCCATCATGTGTATGAGGATCTTCAAGGGATCAAAGACACCTTGTCAATTGTGAAAGGTGTGCTATTGGATGCTGAGGAGAAGAAGGAACAGAAGCATGGCTTGCGTGAATGGCTGAGGCAGATTCAACGCGTCTGCTACTCTGCTGAAGATTTATTTGATGAATTTGATTGCCAAACATTGCGAAAGCAAGTTGTCAAAGCTTCTGGCAGCATCAAGATGAAGGTAGGACACTTTTTTTCATTGTCCAATCCTCTTATTTTCCGTCTTAGGATGGCTCGTCAAATCAAAGATGTTAAGGATAGATTGAATAAGGTAGCAGCTGATGGGAACAAGTTTGGTCTTGAGAGGGTTGAGGTTGACCAAAGAGTTCTGCAAAGGAGAGAAATGACTTATTCCCATGTTGATGCTTCTGGTGTGTTAGGAAGGGAGAATGATAGGGAAGAAATTATCAAGCTTTTGTTGCAACCTCTCCCTGATAGTGGCTGTGATCAAAGCCTGTGTGTTATTCCCATAGTCGGAATTGGTGGGTTGGGGAAGACCACACTTGCGAAGTTGGTGTTCAATGATAGGAGAATGGATGAAGTTTTTCAACTGAAGATGTGGGTCTTTGTCTCTGATGATTTTGATATTAGGCAGATCATTATTAAAATCATCAACTCTGCTTCTGCTTCGGCTCCTACTATTGCTCTTGGTCTCCAAGAAAATGTCAACCACTTAGACATTGAGCAGCTACAGATGATTCTCAGATATAAAATTGTTGGTCATAAGTTTTTACTCGTATTAGATGATATATGGAATGAGGACCGTGCAAAATGGATAGAGTTGAAAGACTTAATAAATAGTGGAGCTTTGGGAAGCAAGGTCTTGGTGACAACACGTAGTAACTCAATTGCTTCAATGATGGGCACTGTTCCCTCCTACAATTTAGCAGGCCTTTCTCTGGATAATTGTTTATCTCTGTTTGTCAAATGGGCATTCAAGGAAGGAGAAGATAAAAAATATCCAAATCTAGTGGAGATCGGAAAGGATATTGTGAAAAAATGTGGAGGGGTTCCATTGGCAGTAAGAACATTAGGAAGTTCCCTGTTCTCAAAGTTTGAGTTAGATAGTTGGGAGTTTGTAAGAAACCATGAAATTTGGAACTTAAAACAAAAGAAAGATGACATCTTACCGGCCCTTAAGTTGAGCTATGATCAAATGCCATCCAATTTGAGGCACTGTTTCGCTGTGTTTTCTCTTTTCCCTAAAGGTTTTGGATGTAGTAGTAGTAAAATTTTTAATATTTGGCTGGTATTTGGATTGCTTAAATCTCGAGATGGAAGTCAAAATCTGGAGAATGTTGCTAGACAGTATATTGCTGAGTTAGATTCAAGATCATTTCTTGAGGATTTTGAAGACTTTGGTCACTTGGACTATTTCAAATTGCATGATTTGGTACATGATCTTGCACTGTATGTTGCAAAAGAGGAGTTTCTGGTGGTAAACTCCCATACTCGCTATATACCCGAGCAAGTAAGGCATTTATCAGTTGTTGAAAATGATTCACTTAGTCCTGCTTTGTTCCCCAAGTCCAGAACTCTGAGAACTATATTATTTCCCATTGACCGAATAGGTGTTCATTCTGAAGCTCTGGTTGATACATGGATAACAAGATATAAATATTTACGGGCTTTAGATTTATGTGATTCTTCATTTGAGACTCTGCCTAATTCAATTGCTAAATTGGAGCATCTACGAGCCCTCGATCTTTCAAATAATTTCAAAATAAAAAGTCTTCCTCATTCTATTTGCAAACTACAAAATTTGCAATTTTTATCACTCAGAGGATGCATGCAGTTTGAAACATTGCCCAGAGGATTAAGGAAATTAACCAGCCTTCAACAATTGTATATAACCACAAAACAATCTGTTCTATCAGAGGATGTATTTGCAAGCTTGAGCAATCTTCAATCCTTGGGTTTTGAACATTGTGTCAATTTGAAGTTTTTGTTCAGAGGGGCAGCAGAACTTCCTTCCCTTCAAGCCTTGTTTGTTCAATCATGTGGGAACCTAGAGTCCTTACCTCTTTACATACTTCCTAAACTAGAGGTTCTGTTAGTAATACGATGCGAGATGGTAAAGATGCCGTTGAACTACGAAACCCCAATCAAAAAATTAATGATGAAATTTCTGCATCTTGAGCATCTTCCAAGGCAAATGACATTGCCTCAATGGATTGAAGGAGCTTCTGACACCCTAAAGACATTGCTAATTTTAGATTTTCCTAGTCTTGAGATGCTTCCTGAGTGGCTAACAAGAATGACTGATCTTAAGACACTCCATATTGTGAACTGTGATCAACTGATGTGTCTCCCAAGTGACATGCATCACCTCACTGCCCTTGAAGATTTGACCATAGATGGTTGTCCTGAGTTGTGTCGAAAATGTCAGCCACATTCTGGTGAGTACTGGCCCTTGATTGTTCACATCAAAAGCGTTTCCATTGCAGATCCAAGACAAGAGGGGAAACTCCCTTATCGAATGCAATCGAAGCTGCGGTGGCAATTGCGCGGTGATATTAAGAAAACAAAACAAAACAATTTGGAGAAGAAAAGTAGCTGTATTCTTGAGACGTGA 2706 0.3939 MNMAEFFVFDIAESLLRKLASHVYEEASRAHHVYEDLQGIKDTLSIVKGVLLDAEEKKEQKHGLREWLRQIQRVCYSAEDLFDEFDCQTLRKQVVKASGSIKMKVGHFFSLSNPLIFRLRMARQIKDVKDRLNKVAADGNKFGLERVEVDQRVLQRREMTYSHVDASGVLGRENDREEIIKLLLQPLPDSGCDQSLCVIPIVGIGGLGKTTLAKLVFNDRRMDEVFQLKMWVFVSDDFDIRQIIIKIINSASASAPTIALGLQENVNHLDIEQLQMILRYKIVGHKFLLVLDDIWNEDRAKWIELKDLINSGALGSKVLVTTRSNSIASMMGTVPSYNLAGLSLDNCLSLFVKWAFKEGEDKKYPNLVEIGKDIVKKCGGVPLAVRTLGSSLFSKFELDSWEFVRNHEIWNLKQKKDDILPALKLSYDQMPSNLRHCFAVFSLFPKGFGCSSSKIFNIWLVFGLLKSRDGSQNLENVARQYIAELDSRSFLEDFEDFGHLDYFKLHDLVHDLALYVAKEEFLVVNSHTRYIPEQVRHLSVVENDSLSPALFPKSRTLRTILFPIDRIGVHSEALVDTWITRYKYLRALDLCDSSFETLPNSIAKLEHLRALDLSNNFKIKSLPHSICKLQNLQFLSLRGCMQFETLPRGLRKLTSLQQLYITTKQSVLSEDVFASLSNLQSLGFEHCVNLKFLFRGAAELPSLQALFVQSCGNLESLPLYILPKLEVLLVIRCEMVKMPLNYETPIKKLMMKFLHLEHLPRQMTLPQWIEGASDTLKTLLILDFPSLEMLPEWLTRMTDLKTLHIVNCDQLMCLPSDMHHLTALEDLTIDGCPELCRKCQPHSGEYWPLIVHIKSVSIADPRQEGKLPYRMQSKLRWQLRGDIKKTKQNNLEKKSSCILET* 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1212 901 Pfam Leucine rich repeat 585 640 IPR001611 GO:0005515
Apr4g1212 901 Pfam Rx N-terminal domain 13 98 IPR041118 -
Apr4g1212 901 Gene3D - 12 126 - -
Apr4g1212 901 Gene3D - 426 515 IPR036388 -
Apr4g1212 901 Gene3D - 151 334 IPR027417 -
Apr4g1212 901 ProSiteProfiles Leucine-rich repeat profile. 607 629 IPR001611 GO:0005515
Apr4g1212 901 CDD RX-CC_like 4 136 IPR038005 -
Apr4g1212 901 Pfam NB-ARC domain 189 428 IPR002182 GO:0043531
Apr4g1212 901 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 439 IPR027417 -
Apr4g1212 901 PRINTS Disease resistance protein signature 198 213 - -
Apr4g1212 901 PRINTS Disease resistance protein signature 281 295 - -
Apr4g1212 901 PRINTS Disease resistance protein signature 378 392 - -
Apr4g1212 901 PRINTS Disease resistance protein signature 603 619 - -
Apr4g1212 901 PANTHER DISEASE RESISTANCE PROTEIN RP 8 761 IPR044974 GO:0006952
Apr4g1212 901 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 8 761 - -
Apr4g1212 901 Gene3D - 342 425 IPR042197 -
Apr4g1212 901 Gene3D Ribonuclease Inhibitor 524 874 IPR032675 -
Apr4g1212 901 SUPERFAMILY L domain-like 504 850 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1212 Apr-Chr4 10705956 10710423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1212 199 835 WRKY Transcription Factor Family AT5G45050 21.353 2.14e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1212 - - gmx:100794422 1268.06