Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1211 ATGGCTCGTCAAATCAAAGATGTTAAGGATAGATTGAATAAGGTAGCAGCTGATGGGAACAAGTTTGGCCTTGAGAGGATTGATGTTGACCAAAGAGTTCTGCAAAGGAGAGAAATGACTTATTCCCATGTTGATGCTTCTGGTGTGTTAGGAAGGGAGAATGATAGGGAAGAAATTATCAAGCTTTTGTTGCAACCTCTCCCTGATGGTGGCTGTGATCAAAGCCTGTGTGTTATTCCCATAGTCGGTATTGGTGGCTTGGGGAAGACCACACTTGCGAAGTTGGTGTTCAATGATAGGAGGATGGATGAAGTTTTTCAATTAAAGATGTGGGTCTGTGTCTCGGATGATTTTGATATTAGGCAGATCATTATTAAAATCATCAACTCTGCTTCTGCTTCAGCTCCAACTATTGCTCTTGGTCTCCAAGAAAATGTCAACCACTTAGACATTGAGCAGCTACAGAGAATTCTCAGATATAAACTTGTTGGTCATAAGTTTTTACTCGTCTTAGATGATATATGGAATGATAATCGTGCAAAATGGATAGAGTTGAAAGACTTGATAAACAGTGGAGCTGTGGGAAGCAAGGTCTTGGTGACAACACGTAGTAACTCAATTGCTTCAATGATGGGCACTGTTCCCTCCTACAATTTAGCAGGCCTTTCTCTGGAGAATTGTTTATCTCTGTTTGTCAAATGGGCATTCAAGGAAGGAGAAGATAAAAAATATCCAAATCTAGTGGAGATTGGAAAGGATATTGTGAAAAAATGTCGAGGGGTTCCATTGGCAGTGAAAACATTAGGAAGTTCCCTGTTCTCAAATTTTTCGTTGGATAGTTGGGAATTTGTAAGAAACCATGAAATTTGGAAATTAAAACAAAAGAAAGGTGACATTTTACCGGCCCTTAAGCTGAGCTATGATCAAATGCCATCCAATTTGAGGCACTGTTTTGCTTTGTTTTCACTTTTCCCTAAAGATTTTGGCTTAACTCATTTTCATGCTAGTAATCTTTGGCTGGCACTTGGATTGCTTCAATCTCCAGATGGAAGTCAAAAGCCTGAGAACATTGCAAGGCAATATATTGTTGAGTTACATTCAAGATCATTTCTTGAGGACTTTGAGGACCTTGGCCACATTTACTATTTCAAAGTACATGATTTGGTACATGATCTTGCACTGTATGTTGCAAAAGAGGAGTTTCTTGTGGTAAATTCCTGTTCAAGCAATATACTTGATCAAGTAATGCATTTATCAATTGTTGAAAATGATTCACTTAGCCCTACTTTGTCCCCCAAGTCTCGCGTGAGAACTATTTTATTTCCCATCGATGGAATAGGTGTTGACAGTGAAGCTCTTTTGGAGACATGGATATCAAGATACAAATACTTACGGGTTTTAGATTTAAGTGATTCCTCTTTTGAGAATCTACCTAATTCAATTGCTAAATTGGAGCATCTGCGATCCCTCGATCTTGCAAATAATTGCAAAATAAAAAGACTTCCTCGTTCTATTTGCAAACTACAAAATTTGCAATTTTTATCACTCAGAGGATGCATGCAGCTTGAAACATTGCCTAGAGGATTAGGGAATCTAATCAGCCTTCAACATTTGTATATAACCACAAAACAATCTGTTCTGTCAGAGAATGTATTTGCAAGCTTGAGTAATCTTGAATACTTGGGTTTTGAATACTGTGACAATTTGAAGCTTTTGTTCAGAGGGGTAGCAGAACTCTCTTCCCTTCAAGCCTTGATTGTTCAATCATGTGGGAGCCTAGAGTCCTTACCTCTTTACATTCTTCCTAAATTAGAGGTTCTGTTAGTAATACGATGTGAGATGCTAAAGCTGCCGTTGAACTACGAAACCCCAATCCAAAAGTTAAGGATGAAATTTCTGCATCTTGAGCATTTTCCAAGGCAGATGGCATTGCCTGAATGGATTCAAGGAGCTTCTGACACCCTAAAGACATTGCTAATTTTAGATTTTCCTAGTCTTGAGGTGCTTCCTGAGTGGCTAACAAGAATGACTAATCTTAAGATACTCCATATTGTGAACTGTCCTCAACTGACGTGTCTCCCAAGTGACATGCAACACCTCACTGCCCTTGAAGATTTGACCATAGATGGTTGTCCTGAGTTGTGTCGAAAATGTCAGCCACAGTCTGGTGAGTACTGGCCGTTGATTGCTCACATCAAACACGTTTCCATTGCAGATCCAAGACAAGAGGGGAAATTTCTTTTTCGAATGCAATCGCGGTTGCGGCTGAGATTGCACGGTTGGTAA 2286 0.3946 MARQIKDVKDRLNKVAADGNKFGLERIDVDQRVLQRREMTYSHVDASGVLGRENDREEIIKLLLQPLPDGGCDQSLCVIPIVGIGGLGKTTLAKLVFNDRRMDEVFQLKMWVCVSDDFDIRQIIIKIINSASASAPTIALGLQENVNHLDIEQLQRILRYKLVGHKFLLVLDDIWNDNRAKWIELKDLINSGAVGSKVLVTTRSNSIASMMGTVPSYNLAGLSLENCLSLFVKWAFKEGEDKKYPNLVEIGKDIVKKCRGVPLAVKTLGSSLFSNFSLDSWEFVRNHEIWKLKQKKGDILPALKLSYDQMPSNLRHCFALFSLFPKDFGLTHFHASNLWLALGLLQSPDGSQKPENIARQYIVELHSRSFLEDFEDLGHIYYFKVHDLVHDLALYVAKEEFLVVNSCSSNILDQVMHLSIVENDSLSPTLSPKSRVRTILFPIDGIGVDSEALLETWISRYKYLRVLDLSDSSFENLPNSIAKLEHLRSLDLANNCKIKRLPRSICKLQNLQFLSLRGCMQLETLPRGLGNLISLQHLYITTKQSVLSENVFASLSNLEYLGFEYCDNLKLLFRGVAELSSLQALIVQSCGSLESLPLYILPKLEVLLVIRCEMLKLPLNYETPIQKLRMKFLHLEHFPRQMALPEWIQGASDTLKTLLILDFPSLEVLPEWLTRMTNLKILHIVNCPQLTCLPSDMQHLTALEDLTIDGCPELCRKCQPQSGEYWPLIAHIKHVSIADPRQEGKFLFRMQSRLRLRLHGW* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1211 761 Pfam Leucine rich repeat 463 519 IPR001611 GO:0005515
Apr4g1211 761 PRINTS Disease resistance protein signature 78 93 - -
Apr4g1211 761 PRINTS Disease resistance protein signature 161 175 - -
Apr4g1211 761 PRINTS Disease resistance protein signature 258 272 - -
Apr4g1211 761 PRINTS Disease resistance protein signature 482 498 - -
Apr4g1211 761 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 320 IPR027417 -
Apr4g1211 761 Pfam NB-ARC domain 69 308 IPR002182 GO:0043531
Apr4g1211 761 Gene3D - 31 214 IPR027417 -
Apr4g1211 761 Gene3D - 221 305 IPR042197 -
Apr4g1211 761 Gene3D - 306 395 IPR036388 -
Apr4g1211 761 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 11 631 - -
Apr4g1211 761 SUPERFAMILY L domain-like 384 727 - -
Apr4g1211 761 Gene3D Ribonuclease Inhibitor 414 738 IPR032675 -
Apr4g1211 761 PANTHER DISEASE RESISTANCE PROTEIN RP 11 631 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1211 Apr-Chr4 10692543 10695895 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1211 79 714 WRKY Transcription Factor Family AT5G45050 22.105 7.82e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1211 - - gmx:100795479 1118.22