Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1185 ATGGCTGCAACTACATTCTGTACATACCTGTTCCTTCTCTCTGTGATCTTTCCAATCTTCAATCTTAGTTCATCTTCATCAGAGGGAGATATTCTTCTCTCCTTCAAGTCTACCATTGAAGACTCCAAGAAGGCCTTGTCTAGCTGGTCCAATGCTTCATCAAACCACTACTGTACCTGGATTGGAATCACTTGCTCCACCACACCTTCACGCTCAGTAACTTCTATTAACCTTCAGAGCTTCAACCTTTCTGGGGACATCTCATCTTCTATATGTGATCTTCCAAATCTGTCTTATCTCAACCTTGCTGACAATATCTTCAACCAGCCTATTCCTCTTCATCTTTCTCAGTGCAGTTCCTTGGAGACTTTGAATCTCAGCGCCAATCTCATATGGGGCACTATCCCATCTCAGATTTCTCAGTTTGCGTCATTGAAAGTGCTTGATTTGAGTAGAAACCACATAGAAGGAAACATCCCAGAAAGCTTAGGCTCCTTGAAGAACCTCCAAGTTCTCAACATGGGAAGTAACATGCTGTCAGGTAGTGTTCCTGCTGTCTTCGGCAATCTAACTAAGCTTGAAGTTCTTGATTTGTCTCAGAATCCAAACTTGGTGAGTGAGATTCCAGAGGATATTGGTAAACTTGTAAATCTAGAGCAACTACTGTTGCAAAGTTCTTCTTTTCAAGGTGAAATTCCAGGTTCTCTTGTGGGCCTGAGTAATTTGACCCATTTGGATTTGTCTGAGAACAACTTAACAGGCGGTGTTCCGCAGGCGCTTCCATCTTCTCTCAAGAACCTGGTTTCTTTTGATGTTTCGCAAAACAAGCTTTTGGGGCCATTTCCAAATGGCATCTGCAAACAAGGCCTTATAAATCTCAGCCTCCATACAAATGCCTTCACTGGTTCAATACTCAACTCCATTGGTGAATGCAAGAGTCTTGAGAGATTCCAAGTCCAGAACAATGGTTTCTCTGGAGATTTCCCAATTGCACTGTGGTCATTACCCAAAATTAAGCTCATTAGAGCTGAAAACAACAGATTCTCAGGACAAGTACCAGAGTCCATATCAGGAGCTGTTCAGTTGGAGCAAGTTCAGATTGACAATAACAGCTTTGCTGGTAAAATTCCTCAAGGTCTTGGCTTTGTCAAGAGCTTATACAGATTTTCTGCTTCTCTCAATCGCTTCTATGGTGAACTACCTCCAAATTTTTGTGACTCTCCTGTTATGAGCATAGTAAATCTTTCCCACAATTCTCTTTCTGGTGAAATCCCTGAGCTGAAAAAATGCAGGAAACTAGTTTCATTGTCTTTGGCTGACAACAGTCTCACTGGAGAAATGCCTCCTTCCCTTGCTGAGTTACCTGTGCTGACTTACCTTGATCTTTCAGACAACAATCTCACAGGTTCAATCCCACCAGGGCTTCAAAACTTGAAGCTTGCTCTTTTCAATGTGTCCTTCAATCATCTATCAGGTAAAGTACCATATTCCTTGATTTCTGGCCTACCAGCCTCATTTTTGGAAGGAAACCCTGGTCTTTGTGGCATTGGATTACCCAACTCTTGTTCTGATGACATGCCAAGACACCACACTGGTGGCATTACAACCTTAACATGTGCCCTCATCTCTTTAGCCTTTGTTGCTGGCACTGCCATTGTTGTTGGTGGGTTTATATTGTATAGGAGATCTTGCAAGGGGAACCAAGTGGGACTGTGGCGCTCAGTGTTCTTCTACCCTCTAAGAATTACTGAGCATGATCTACTTATAGGGATGAATGAGAAAAGCTCAATGGGGAATGGTGGTGTTTTTGGCAATGTTTATGTTGTGAGTTTGCCTAGTGGTGAACTAGTGGCTGTGAAGAAGCTAGTTAATTTTGGAAACCAGTCCTCAAAAAGTTTGAAAGCTGAGGTCAAGACGTTGGCAAAAATTAGGCATAAGAATGTTGTTAAGATTCTGGGGTTCTGCCACTCTGATGAGTCTGTTTTTCTCATTTATGAGTACTTGCATGGAGGAAGCTTAGGGGATTTGATTTCGCGACAGAATTTTCAGTTGCAGTGGGGAATTCGATTAAAGATTGCCATTGGAGTTGCTCAAGGATTGGCATATCTTCACAAAGATTATGTCCCTCACTTGCTTCACAGAAATGTCAAGTCAAAGAACATTTTGTTGGATGCAAACTTTGAGCCAAAACTAACAGATTTTGCTCTTGATCGTGTTGTGGGAGAAGCTGCATTTCAATCAACTTTGAATTCTGAAGCAATATCTTCCTGTTACATTGCACCAGAATATGGATACAGTAAGAAGGCAACTGAACAATTGGACGTGTACAGCTTTGGTGTTATATTACTAGAGCTAGTATGTGGGAGGGAAGCAGAGGAAACAGAGTCAAGTGACTCACTTGACATAGTGAAGTGGGTTAGAAGGAAAGTGAACATCACCAACGGGGTGCACCAAGTTCTTGATCCTAAAATATCACATACTTGTCAACAAGAAATGATTGGAGTTTTAGATATTGCTCTTCGTTGCACTTCTGTGGTGCCTGAGAAAAGGCCATCAATGGTAGAAGTTGTTAGAGGTCTTCAGTCCCTTGAGTCAAGGACTTGCATTGCAAATTTGCACCAACCAAATGAAGAACCCTCCATTCCAGTCTGA 2652 0.4204 MAATTFCTYLFLLSVIFPIFNLSSSSSEGDILLSFKSTIEDSKKALSSWSNASSNHYCTWIGITCSTTPSRSVTSINLQSFNLSGDISSSICDLPNLSYLNLADNIFNQPIPLHLSQCSSLETLNLSANLIWGTIPSQISQFASLKVLDLSRNHIEGNIPESLGSLKNLQVLNMGSNMLSGSVPAVFGNLTKLEVLDLSQNPNLVSEIPEDIGKLVNLEQLLLQSSSFQGEIPGSLVGLSNLTHLDLSENNLTGGVPQALPSSLKNLVSFDVSQNKLLGPFPNGICKQGLINLSLHTNAFTGSILNSIGECKSLERFQVQNNGFSGDFPIALWSLPKIKLIRAENNRFSGQVPESISGAVQLEQVQIDNNSFAGKIPQGLGFVKSLYRFSASLNRFYGELPPNFCDSPVMSIVNLSHNSLSGEIPELKKCRKLVSLSLADNSLTGEMPPSLAELPVLTYLDLSDNNLTGSIPPGLQNLKLALFNVSFNHLSGKVPYSLISGLPASFLEGNPGLCGIGLPNSCSDDMPRHHTGGITTLTCALISLAFVAGTAIVVGGFILYRRSCKGNQVGLWRSVFFYPLRITEHDLLIGMNEKSSMGNGGVFGNVYVVSLPSGELVAVKKLVNFGNQSSKSLKAEVKTLAKIRHKNVVKILGFCHSDESVFLIYEYLHGGSLGDLISRQNFQLQWGIRLKIAIGVAQGLAYLHKDYVPHLLHRNVKSKNILLDANFEPKLTDFALDRVVGEAAFQSTLNSEAISSCYIAPEYGYSKKATEQLDVYSFGVILLELVCGREAEETESSDSLDIVKWVRRKVNITNGVHQVLDPKISHTCQQEMIGVLDIALRCTSVVPEKRPSMVEVVRGLQSLESRTCIANLHQPNEEPSIPV* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1185 883 SMART LRR_typ_2 454 477 IPR003591 -
Apr4g1185 883 SMART LRR_typ_2 166 189 IPR003591 -
Apr4g1185 883 SMART LRR_typ_2 190 215 IPR003591 -
Apr4g1185 883 SMART LRR_typ_2 239 262 IPR003591 -
Apr4g1185 883 SMART LRR_typ_2 142 165 IPR003591 -
Apr4g1185 883 SMART LRR_typ_2 94 118 IPR003591 -
Apr4g1185 883 Gene3D Phosphorylase Kinase; domain 1 586 667 - -
Apr4g1185 883 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Apr4g1185 883 Pfam Protein kinase domain 593 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1185 883 ProSiteProfiles Leucine-rich repeat profile. 144 167 IPR001611 GO:0005515
Apr4g1185 883 SUPERFAMILY Protein kinase-like (PK-like) 600 859 IPR011009 -
Apr4g1185 883 ProSiteProfiles Protein kinase domain profile. 592 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1185 883 Gene3D Transferase(Phosphotransferase) domain 1 668 877 - -
Apr4g1185 883 ProSiteProfiles Leucine-rich repeat profile. 456 479 IPR001611 GO:0005515
Apr4g1185 883 Gene3D Ribonuclease Inhibitor 184 288 IPR032675 -
Apr4g1185 883 SUPERFAMILY L domain-like 290 518 - -
Apr4g1185 883 Gene3D Ribonuclease Inhibitor 289 522 IPR032675 -
Apr4g1185 883 Gene3D Ribonuclease Inhibitor 25 183 IPR032675 -
Apr4g1185 883 PRINTS Leucine-rich repeat signature 242 255 - -
Apr4g1185 883 PRINTS Leucine-rich repeat signature 454 467 - -
Apr4g1185 883 PANTHER - 6 869 - -
Apr4g1185 883 Pfam Leucine rich repeat 120 179 IPR001611 GO:0005515
Apr4g1185 883 Pfam Leucine rich repeat 217 277 IPR001611 GO:0005515
Apr4g1185 883 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 869 - -
Apr4g1185 883 SUPERFAMILY L domain-like 26 287 - -
Apr4g1185 883 Pfam Leucine Rich Repeat 457 478 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1185 Apr-Chr4 10317292 10320622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1185 32 863 Receptor kinase-like Gene Family AT5G06940 65.394 0.0 1070
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr4g1185 Pkinase 1.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1185 - - gmx:100794428 1564.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1185 4 10317292 10320622 Apr4g1185 4 10317292 10320622 ECH