Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1184 ATGAATCCAAGCTCCAATCATGATATCTCATCTGTTCAGCCTATTGCTAATGCTTCTGAAGTAACAGTTTTTGGTGATCATCGGAGGGATGATAGGGAGGAGTCCCAAAAATATGAGGGAGTACAAAAAATCAATGATGGACCAATGTATGAAGTTTATGTACGTGACATTAATGATCATGTAACCGAAAGCAATCGAACAAGTAAATTTGACAAGGCCGAGACAGCAGCCAGAGCTCATGACTTGGTGGCCTTCAAACTTTGGGGATCCAGAGCAAAAACAAATTTTCCAGAAACTCAATACAAGACAGCACTGCAGGCTATGGCTGACATGACACAAACTGAAGTTGTGGATACTGTCAAAAGGTTAAGTTTCACTTTTTCCAAACTCATGTCCATGTATCGTGGAGTCACCAGGTATATCAGAAACACAGAAGAGGAAGCGGGAAGGGCTTTTGATGTTGAAAGCATAAAGCTGAAAGGGCACAACGCCATTACTAATTTTCATATCAAGTTTTACAACGTTGAGGCCATTCAGCATGGGGAAACTGACGAGAAAATAATTTATAAGCCAAAAGACAGTGTCAACATCGCGCAAATTTTTCGGCCTTTTGCGCATCTTGCGAGAATTATGATCAATTGGAACGAAGAGGGGGAGCAGCAACTTGAAAGCCTAATGGAAATTGATGGTGATGTTAATGGATAA 705 0.4085 MNPSSNHDISSVQPIANASEVTVFGDHRRDDREESQKYEGVQKINDGPMYEVYVRDINDHVTESNRTSKFDKAETAARAHDLVAFKLWGSRAKTNFPETQYKTALQAMADMTQTEVVDTVKRLSFTFSKLMSMYRGVTRYIRNTEEEAGRAFDVESIKLKGHNAITNFHIKFYNVEAIQHGETDEKIIYKPKDSVNIAQIFRPFAHLARIMINWNEEGEQQLESLMEIDGDVNG* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1184 234 Gene3D AP2/ERF domain 36 99 IPR036955 GO:0003700|GO:0006355
Apr4g1184 234 SMART rav1_2 133 175 IPR001471 GO:0003700|GO:0006355
Apr4g1184 234 SMART rav1_2 37 103 IPR001471 GO:0003700|GO:0006355
Apr4g1184 234 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 69 182 - -
Apr4g1184 234 ProSiteProfiles AP2/ERF domain profile. 37 97 IPR001471 GO:0003700|GO:0006355
Apr4g1184 234 MobiDBLite consensus disorder prediction 23 38 - -
Apr4g1184 234 MobiDBLite consensus disorder prediction 1 38 - -
Apr4g1184 234 SUPERFAMILY DNA-binding domain 65 98 IPR016177 GO:0003677
Apr4g1184 234 MobiDBLite consensus disorder prediction 1 18 - -
Apr4g1184 234 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL7 69 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1184 Apr-Chr4 10299746 10302255 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1184 70 178 AP2-EREBP Transcription Factor Family AT1G51190 42.748 1.21e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1184 K09285 - aprc:113862154 471.855