Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1176 ATGGATGCTGCTGGTGCTAATGTTTTGTGTTACATCATCTTCACCTCCTTAGCTTTGCTTGTTTTCACTTTAATTGTTAAATCACTTAGCAAACAAACCACAAATTGCAGCACCAAGCTTCAACCTCCACCAAGCCCACCAAAACTACCAATCATCGGCCACCTTCATCTTCTTGGCTCAGTCGTACCAAAATCATTCCAAACACTGGGGCAAGTGTTGAAAACCCATGAACTTAATTTCTGCAACCGACCCGAGTTTGGATCCTCGGAGTATTTCCCATATAAAGGGTCTTATTTCGTCACTGCCCCATATGGCTCTTATTGGCGGTTCATGAAGAAGCTATGTGTGACTCAACTTCTATCAAGCTCTCAGCTTGGTCGATTCATGCACATCCGAGAACAGGAGATAAAGAAGCTCTTGAAATCTTTGATGGGGTGTTCCATTGAAGGTAGGGCCACGGATTTGACTTTGGACCTCACTGCTTTGACAAATAATATCCTGTGTCGGATGGCTATGAGTTCCACATGCCTAGATAAAGTTAATGATGCTGATGAGATTCATGGCTTGGTTCATGAGTTTTTCCATGTCGGAGCTAAATTGAGCATGGGTGAGATACTTGGACCTTTGGGAAAGTTGGACTTGTTTGGGTATGGGAAAAGGCTTGCAAAAATAGTTGGCAAGTTCGACCGGATTTTGGAGCGCATCTTGGAGGAACATGAAGAGAAAAACACCGAGGATTGTCAAGGAGGAACAGGGGACATGATGGATATTCTGTTACAAGTTTATAAGGATCCAAATGCTGAAGTGAAGTTAAAAAGGAATGACATCAAGGCCTTTTTCCTAGATATTTTTCTTGCGGGAACAGATACATCTTCAGCGGCGTTGCAATGGGGCATGGCAGAGATAATGAACAACCCACGAGTGTTAAAAAAGCTGAAGGCAGAGATTGATGCAGTGGTGGGTACTAGCAGGCTAGTCACTGAATCAGACCTTCCAAATCTACATTACCTCCAAGTCGTTGTGAAGGAAGTGCTAAGACTCCATCCAACGGCGCCGTTTGTTCTCAGACAATCAGCACAAGATTGCACCATCAACGGCTATGATTTGAAGAGCCAAACAAGGACACTGATAAATGTATACGCGATCATGCGGGACCCAGAAGCGTGGGCCCACCCAGAGGAGTTTATGCCAGAGAGGTTCTTGGAACCACGTGATGGGATCAACCGTGGAGATGAACGATTGATTAAAATAGACGGTGATGATTTCAGGTATTTTCCATTTGGGTTTGGTAGGAGGGGATGTCCTGGATCTTCCCTCGCCTTAACGGTGATACAAGTGACTATTGCAGCGTTGATCCAATGCTTTGAATGGAAAATCAAAGGTGGAGATAGGGTTGATATGGAAGTAGGGTCATCGTTTTCTGCGGGATTGCTTTCAAGTTACTTCACTTTCCGTAAGATCCATCATGAGGATTACCTTGCATTATGGGATGTTCACATGACAATGCGTGGTTCTATTATTAAAGGAAAAGATTCAAATATGGCTGATTACCAAGGCTACGTCCTACTGTTTTGCATATGGCTAGTTTCCACAATAGTGGTTCGAGCCTTAATCACAAAAAAACATAACAAGGCTAATAAACCACCAAGCCCATTAGCCTTACCCATCATTGGACACCTTCACCATCTTGGTCCAATAGCTCACCAGGCTCTTCACAAACTCTCAACCCGCTATGGGCCCATCATGCACCTTCTCCTTGGTTCCGTGCCTTGTGTCGTAGCTTCCACACCAGAAGCAGCCAAAGAGTTCCTTAGAACTCACGAAACCCATTTCTCCAACCGCCCTAAAAGTTCTGCGGTTGATTACATAACATATGGCTCCCAAGACTTCTCCTTCGCCCCATATGGACCTTATTGGAAATTCATGAAGAAAATATGCATGTCTGAGCTTCTGGGGGGTCACACACTGAACCAACTTCTTCCTCTGAGGAGACAAGAGACGTTAAGGTTTCTAAGACTTTTGTTCAAGAAAGCCGGTGAGGCCATTGATGTTGGAGGGGAATTGTTGACACTGTCGAATAACGTTGTTTCAAGGATGGTTATGGGCCAAACATGTTGTGATAATGATGATGAAGCCGAAGAGGTGAGGAAGTTGGTGCAAGACACCGCACATCTCACGGGGAAGGTTAATGTTTCGGACTTTATTTGGTTCTTTAAGAACTGGGATTTGCAAGGGTTCGGGAAAAGACTCAAGGAAATTCGAGACAGGTTTGACACCATGATGGAGAGGGCAATTAAGGAGCATGAAGAGGAAAGGAGGAAAAGAAAGGAACTGGGTGGTGGAGATGATCGAATCAAGGATTTACTTGATATTTTATTGGACATCCATGAGGATGAGAACTCTGAGATGAAATTGACAATAGAGAACATAAAGGCCTTCATCTTGGACATATTTATAGCAGGAACAGACACTTCAGCTTTAACAACGTTGTGGGCTTTGGCCGAGTTGATTAACCACCCACATGTGATGGAGAGAGCAAGACAAGAGATTGATATTGTGATTGGAAAGAGTAGAATAGTAGAAGAATCAGACCTTGTCAACCTTCCTTATCTGCAAGCCATAGTCAAAGAAACACTAAGGATTCATCCAACAGGTCCATTAATTGTTAGAGAGTCATCTGAAAGCAGCACTATTTGGGGCTATGATATTCCAGCAAAGACCCAGTTGTTTGTTAATGTATGGGCTATTGGGAGGGACCCCAATCACTGGGAAAACCCACTTGAGTTCATACCAGAGAGGTTTATAAGTGAAGAGGGAAGTGAGAAAAGAGAATTAGATGTGAGGGGACAACATTTTCACTTGATTCCATTTGGGAGTGGAAGAAGAGGGTGTCCTGGGACCTCACTGGCTTTGCAGGTTGTGCAGGCTAACCTTGCTGCTATGATTCAGTGCTTTGAATGGAAGGTTTATGGAGGCAAAGAAACTGTTGACATGGAAGAGAAACCCGGGTTAACTCTTTCAAGGGCTCATCCATTGATTTGTGTCCCAGTACCTAGGCTTAATCCTTTTCCTTCCATGTGA 3081 0.4395 MDAAGANVLCYIIFTSLALLVFTLIVKSLSKQTTNCSTKLQPPPSPPKLPIIGHLHLLGSVVPKSFQTLGQVLKTHELNFCNRPEFGSSEYFPYKGSYFVTAPYGSYWRFMKKLCVTQLLSSSQLGRFMHIREQEIKKLLKSLMGCSIEGRATDLTLDLTALTNNILCRMAMSSTCLDKVNDADEIHGLVHEFFHVGAKLSMGEILGPLGKLDLFGYGKRLAKIVGKFDRILERILEEHEEKNTEDCQGGTGDMMDILLQVYKDPNAEVKLKRNDIKAFFLDIFLAGTDTSSAALQWGMAEIMNNPRVLKKLKAEIDAVVGTSRLVTESDLPNLHYLQVVVKEVLRLHPTAPFVLRQSAQDCTINGYDLKSQTRTLINVYAIMRDPEAWAHPEEFMPERFLEPRDGINRGDERLIKIDGDDFRYFPFGFGRRGCPGSSLALTVIQVTIAALIQCFEWKIKGGDRVDMEVGSSFSAGLLSSYFTFRKIHHEDYLALWDVHMTMRGSIIKGKDSNMADYQGYVLLFCIWLVSTIVVRALITKKHNKANKPPSPLALPIIGHLHHLGPIAHQALHKLSTRYGPIMHLLLGSVPCVVASTPEAAKEFLRTHETHFSNRPKSSAVDYITYGSQDFSFAPYGPYWKFMKKICMSELLGGHTLNQLLPLRRQETLRFLRLLFKKAGEAIDVGGELLTLSNNVVSRMVMGQTCCDNDDEAEEVRKLVQDTAHLTGKVNVSDFIWFFKNWDLQGFGKRLKEIRDRFDTMMERAIKEHEEERRKRKELGGGDDRIKDLLDILLDIHEDENSEMKLTIENIKAFILDIFIAGTDTSALTTLWALAELINHPHVMERARQEIDIVIGKSRIVEESDLVNLPYLQAIVKETLRIHPTGPLIVRESSESSTIWGYDIPAKTQLFVNVWAIGRDPNHWENPLEFIPERFISEEGSEKRELDVRGQHFHLIPFGSGRRGCPGTSLALQVVQANLAAMIQCFEWKVYGGKETVDMEEKPGLTLSRAHPLICVPVPRLNPFPSM* 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1176 1026 PANTHER CYTOCHROME P450, FAMILY 712, SUBFAMILY A, POLYPEPTIDE 1 517 1024 - -
Apr4g1176 1026 PANTHER CYTOCHROME P450, FAMILY 712, SUBFAMILY A, POLYPEPTIDE 1 71 478 - -
Apr4g1176 1026 PANTHER CYTOCHROME P450, FAMILY 712, SUBFAMILY A, POLYPEPTIDE 1 7 70 - -
Apr4g1176 1026 SUPERFAMILY Cytochrome P450 548 1019 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1176 1026 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 957 966 IPR017972 GO:0005506|GO:0016705
Apr4g1176 1026 Gene3D Cytochrome P450 538 1014 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1176 1026 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1176 1026 PRINTS P450 superfamily signature 873 884 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1176 1026 PRINTS P450 superfamily signature 955 964 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1176 1026 PRINTS P450 superfamily signature 964 975 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1176 1026 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 517 1024 - -
Apr4g1176 1026 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 71 478 - -
Apr4g1176 1026 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 7 70 - -
Apr4g1176 1026 SUPERFAMILY Cytochrome P450 43 474 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1176 1026 PRINTS E-class P450 group I signature 575 594 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1176 1026 PRINTS E-class P450 group I signature 599 620 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1176 1026 PRINTS E-class P450 group I signature 691 709 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1176 1026 PRINTS E-class P450 group I signature 809 826 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1176 1026 PRINTS E-class P450 group I signature 829 855 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1176 1026 PRINTS E-class P450 group I signature 872 890 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1176 1026 PRINTS E-class P450 group I signature 912 936 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1176 1026 PRINTS E-class P450 group I signature 954 964 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1176 1026 PRINTS E-class P450 group I signature 964 987 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1176 1026 Gene3D Cytochrome P450 27 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1176 1026 Pfam Cytochrome P450 548 1011 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1176 1026 Pfam Cytochrome P450 69 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1176 1026 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1176 Apr-Chr4 10127716 10134023 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1176 9 473 Cytochrome P450 AT5G06900 37.449 8.36e-108 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1176 K24188 - gmx:100779342 845.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1176 4 10127716 10134023 Apr4g1176 4 10127716 10134023 ECH
Apr4g1176 4 10127716 10134023 Apr8g0781 8 7902992 7904663 PCT
Apr8g0779 8 7885797 7889668 Apr4g1176 4 10127716 10134023 PCT