Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1175 ATGCCTGATTTTCAAGTCTTGCTCATATGTTTGTTCTCCACCATCGTTCTTGCAACCGTACTAGGGAGAAAACAAAACAGAAAGTCCCTCCTTCCACCGAGTCCCCTTGCCCTACCCATCATTGGACACCTTCACCTTCTCTCCCCAACACCTCATCAAGATTTTCACAAACTCTCAATCCACTATGGACCCATAATACACCTTTTCCTTGGCTCAGTCCCTTGTGTTGTAGCTTCCACAGCAGAAGCCGCCAAAGAGTTCCTTAAAGCCCACGAAACCTCCTTCTCCAACCGCCCCGCTCACACCGTTGCCGTTGAGGCATTAACCTACGGTTTCCAAGACTTCTTGTTTGCACCCTATGGACCCTTTTGGAAGTTCTTGAAGAAACTGTGCATGTCTGAACTTCTCGGTGGCCACATGGTCGACCAGTTCCTTCCCGTGAGGCAACAAGAGACAAAGAGATTCATCAAACTTGGGTACCAAAAAGGGTTAGCTGGTGAGGCTGTGGATTTTGGAGGAGAGTTCATAACACTTTCAAACAACGTCGTGTCGAGAATGACCCTGAGTCAAATGAGTTCTGAAAATGAGGACGAAGTTAAAGAGATGAGGAAGCTGGTGGCTGATACCGCTGAGCTTGTAGGGAAGTTCAACATATCTGACTTCATTTGGTTCTTAAAGAGTTTTGATTTGCAGGGTTTCAACAAGAGGTTAAGGGAAATTCAGATCAGGTTTGACACCATAATGGACGGAATGATAAAGAAGCGTGAAGAGGAAAGAAAGAACAATAGGGAAAATGGTGGAACGCATGAAATTAAGGACATGCTTGATGTGTTATTAGAAATACACGAAGATGAGAGTTCTGAAATTAGATTGACCAAAGAGAACATTAAGGCCTTTATCCTGGATATATTTGTTGCTGGGACTGACACGTCAGCTGTGACAATGGAATGGGGAATGGCAGAGTTAATAAACAATCCACATGTGTTGGAGAAAGCGAGGCAAGAGATGGATGCAGTGGTTGGAAAGAGTAGAATAGTAGAAGAATCAGATATTGTAAATCTTCCTTATCTACAAGCCATAGTTAAAGAAACACTAAGACTTCACCCTGCAGGCCCATTAATTTTTAGGGAGTCATCTAGAAGTGCTGTAGTTTGTGGTTATAATATTGCAGCCAAGACTCGCTTGTTTATCAATGTTTGGGCAATTGGTAGAGACCCCAATCATTGGAAGAACCCACTTGAGTTCAGGCCAGAGAGGTTTATGATTGAAGAGGGAAATGGGCAGAGTCAATTGGATGTAAGAGGACAACACTATCATTTAATTCCATTTGGAAGTGGAAGAAGAGGGTGTCCTGGAACCTCTCTGGCGTTGCAGCTTGTGCACGTGAATCTGGGTGCTATGATTCAGTGTTTCCAATGGAAGGTTGATGGTGGCAATGGCAGGGTAGACATGGAAGAGAAATCTGGCATCACTCTCCCGAGGGCTCACCCCATAGTATGTGTACCTGTTCCAAGACTCGACCCATTTCCTTCTCTGTGA 1539 0.4444 MPDFQVLLICLFSTIVLATVLGRKQNRKSLLPPSPLALPIIGHLHLLSPTPHQDFHKLSIHYGPIIHLFLGSVPCVVASTAEAAKEFLKAHETSFSNRPAHTVAVEALTYGFQDFLFAPYGPFWKFLKKLCMSELLGGHMVDQFLPVRQQETKRFIKLGYQKGLAGEAVDFGGEFITLSNNVVSRMTLSQMSSENEDEVKEMRKLVADTAELVGKFNISDFIWFLKSFDLQGFNKRLREIQIRFDTIMDGMIKKREEERKNNRENGGTHEIKDMLDVLLEIHEDESSEIRLTKENIKAFILDIFVAGTDTSAVTMEWGMAELINNPHVLEKARQEMDAVVGKSRIVEESDIVNLPYLQAIVKETLRLHPAGPLIFRESSRSAVVCGYNIAAKTRLFINVWAIGRDPNHWKNPLEFRPERFMIEEGNGQSQLDVRGQHYHLIPFGSGRRGCPGTSLALQLVHVNLGAMIQCFQWKVDGGNGRVDMEEKSGITLPRAHPIVCVPVPRLDPFPSL* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1175 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Apr4g1175 512 Gene3D Cytochrome P450 17 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1175 512 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1175 512 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1175 512 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1175 512 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1175 512 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 509 - -
Apr4g1175 512 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1175 512 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1175 512 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1175 512 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1175 512 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1175 512 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1175 512 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1175 512 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1175 512 Pfam Cytochrome P450 32 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr4g1175 512 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 4 509 - -
Apr4g1175 512 SUPERFAMILY Cytochrome P450 32 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1175 Apr-Chr4 10124012 10125906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1175 1 505 Cytochrome P450 AT5G06900 47.358 4.18e-174 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1175 K24188 - gmx:100815706 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1175 4 10124012 10125906 Apr4g1175 4 10124012 10125906 ECH
Apr4g1175 4 10124012 10125906 Apr8g0779 8 7885797 7889668 PCT