Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1167 ATGAGTCTCCAAAGCAACTTGCTATCTCTTTTGGTTCCCCTTGCTGCAATTTTTGCATCATTGTATCTCATAAACCCAATTCCACATTTTCTCAACAACTTCACTTATTTAACTCTCACAACCTTGTCACCATCATCTTTGAACTTAGCACCTTTAACTTGCAACCTCCACAGCATCCATCATCATCGACCACACAAGAAACACCCTGATAGTGGGAATGCTGATTCTATTTGTGATGATTTCCCACCAGGCATTCCACCTCCTGATACCAATACCACTTTTTATCTTTGTGTTGATCGAAAAGGGTGCTGTAATTTCACCACAGTACAAGCAGCTGTGAATGCAATTCCTGATTTTAGCTTAAAAAGAACCATAATATGGATAAATAGTGGCATCTACTATGAGAAAGTTATGGTTCCCAAAACCAAACCCAACATTACATTTCAAGGACAAGGTTATACTTCAACTGCAATTGCATGGAATGATACTGCATTGTCCGCAAATGGCACATTTTCTAGTGGCTCTGTACAAGTTTTCGCCTCCAACTTCATTGCTAAGAATATAAGCTTCATGAATTTAGCACCAATTCCAAGTCCTGGGGCTGTTGGTGCACAAGCAGTAGCCATTAGAATTTCGGGAGATCAAAGCGAATTTAGGGGTTGTGGATTCTTTGGAGCCCAAGACACCCTTCATGATGATAAGGGTCGCCATTACTTCAAAGACTGCTATATCCAAGGCTCCATTGACTTCATATTCGGCAATGCAAGGTCACTCTATGAGAATTGTCAACTAGTTTCCATAGCGAATCCCGTACCAGCGGGACAAAAGAGCATAAATGGCGCTGTTACAGCTCATGGTAGAGCTTCAACGGATGAAAACACAGGATTCACATTTGTGAACAGTACAATAGGAGGAAACGGGAGAATATGGTTGGGTCGAGCATGGAGACCTTATTCCCGTGTTGTTTTTGCCTTCACAATTATGTCAGATATCATTGCCCCTGAAGGTTGGAATGATTTCAACGACCCTTCAAGAGATCAGACTGTTTTCTATGGAGAATACAAATGCTCGGGGCCTGGGGCTGATACAAGCATGAGGGCATCTTATGTACAAAGATTAAATGATACACAAGCTTTGGCATTCCTCAACATAACTTTTATCGATGGCGACCAATGGTTGGAAACTTCCAAACTAAGCTAA 1200 0.415 MSLQSNLLSLLVPLAAIFASLYLINPIPHFLNNFTYLTLTTLSPSSLNLAPLTCNLHSIHHHRPHKKHPDSGNADSICDDFPPGIPPPDTNTTFYLCVDRKGCCNFTTVQAAVNAIPDFSLKRTIIWINSGIYYEKVMVPKTKPNITFQGQGYTSTAIAWNDTALSANGTFSSGSVQVFASNFIAKNISFMNLAPIPSPGAVGAQAVAIRISGDQSEFRGCGFFGAQDTLHDDKGRHYFKDCYIQGSIDFIFGNARSLYENCQLVSIANPVPAGQKSINGAVTAHGRASTDENTGFTFVNSTIGGNGRIWLGRAWRPYSRVVFAFTIMSDIIAPEGWNDFNDPSRDQTVFYGEYKCSGPGADTSMRASYVQRLNDTQALAFLNITFIDGDQWLETSKLS* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1167 399 Gene3D - 90 399 IPR012334 -
Apr4g1167 399 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 9 396 - -
Apr4g1167 399 ProSitePatterns Pectinesterase signature 2. 244 253 IPR033131 -
Apr4g1167 399 SUPERFAMILY Pectin lyase-like 94 394 IPR011050 -
Apr4g1167 399 PANTHER PECTINESTERASE 8-RELATED 9 396 - -
Apr4g1167 399 Pfam Pectinesterase 98 390 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1167 Apr-Chr4 10012272 10016010 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1167 67 398 Carbohydrate Esterase AT1G05310 71.988 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1167 - - gmx:100806629 698.738