Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1163 ATGGCAGGGACTGGTTTCTACACCTCCTGTCTTTCCTCCTCCAGCAACTTAGGGACATGTTGGTTGGTATTAAAAACTCACAATGCAAGGGCCGTGCCAGGGAATCTGAAACTACACGGAAGGAGAAGATTGACAATACAAGCAGAAGTGAATTATGTAAATGCTGAAAAAGCTAAGGAACTTTTAGAAGTGGATGGATATGTAGTTCTTGATGTGAGGGATAAAACTCAGTTTGAGCGAGCTCACATAAAATCATGTTATCATGTGCCTCTTTTTATTGAAAATAAAGACAATGATCCTGGTACAATTGTAAAAAGAACTCTGCACAATAATTTTTCTGGGTTGTTCTTTGGGTTACCATTCACTAAGCCAAATCCTGATTTTGTACAATCTGTTAAGAATCAGTTTTCGCCTGAAAGTAAACTTTTGGTTGTGTGCCAGGAAGGACTGAGGTCTGCTGCAGCAGCAGATAAGTTAGAGGAAGCTGGTTTCTCAAATGTAGCATGCATAACATCTGGCCTTCAAACTGCAAAACCAGGGACATTTGATTCTGTTGGGTCCACAGAGTTGCAGGATGCTGGCAAAGCTGGTTTGGTGACAATCCAAGGAAAAATCTCAACTGTGTTGGGAACTGTTCTTATTTGTGCATATTTATTCATTACCTTCTTCCCTGAGCAAGCAGAGAAGCTATTCCAAATGGCCCCTACAGGCTAA 714 0.4104 MAGTGFYTSCLSSSSNLGTCWLVLKTHNARAVPGNLKLHGRRRLTIQAEVNYVNAEKAKELLEVDGYVVLDVRDKTQFERAHIKSCYHVPLFIENKDNDPGTIVKRTLHNNFSGLFFGLPFTKPNPDFVQSVKNQFSPESKLLVVCQEGLRSAAAADKLEEAGFSNVACITSGLQTAKPGTFDSVGSTELQDAGKAGLVTIQGKISTVLGTVLICAYLFITFFPEQAEKLFQMAPTG* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1163 237 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 1 236 IPR044615 -
Apr4g1163 237 CDD RHOD 58 175 - -
Apr4g1163 237 Gene3D - 37 181 IPR036873 -
Apr4g1163 237 ProSiteProfiles Rhodanese domain profile. 63 186 IPR001763 -
Apr4g1163 237 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 48 175 IPR036873 -
Apr4g1163 237 Coils Coil 236 237 - -
Apr4g1163 237 Pfam Rhodanese-like domain 55 175 IPR001763 -
Apr4g1163 237 SMART rhod_4 53 183 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1163 Apr-Chr4 9939880 9943731 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1163 9 231 Sulfurtransferasese or Rhodanese AT2G42220 69.058 8.13e-113 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1163 - - ccaj:109797004 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1163 4 9939880 9943731 Apr4g1163 4 9939880 9943731 ECH