Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1158 ATGATTCACTTTCGAAAACTCAATGCTACCCCAAATCCCTTTCGCCATAAACCCTCGCAAAACCCTAGATTTCAGAGCACAAAAAGTAGAACCCCTGAATCGGATGCCAAAATCCCTGGCAAAGCCACCATAAAAGAAGTCCAAGCAGCATTGTTAGATTACCTTCATTCCACGAGAAGCTTGCAGTTCTTAGACGCAGATAACATGTGCAAAAACTCCCCTTTCTTCCTCCGCGACCTTTTCAACAAAACCCTATCTCAAAACCCTCACGTGGACACCATGCGATCCATCCAGCGCTACCTCCGCTACCACCCCATCAATGAGTTCGAACCCTTCTTCGAAAGCGTGGGTTTGAAACCTTCCGAATACGCGCCCCTTCTTCCCCGCGACATGATTTATCTAAACGACGACGCTCTGTTGATGGAGAATTACCACACACTCTGTAACTACGGCGTTCCCCGCCCCAAGATGGGGAAAATTCTCAAGCTTGCGCCTTTGGTGTTTCGCTACCAAAGTGGGGTTTTGATGTCGAAGCTTCGGGCTTATGAAAATTTGGGTGTCGCACGGACCACATTGGTGGCCATTGTTGTTTCTAGCCCTTGCATTTTGGTTGGGGATGTTAACATTGATTTTGTTAAGGTTGTGGAGAAGTTGAAGGGTGTTGTTGCAAAAGATGGTGATTGGGTTGAAGGGGTGTTGGTAAATGCGGGTTGTTGTAATTGGGATCTTGTGCTTCAGCTTTTTTGTTTGCTTGATAAGGTTTTCAGTGCGGAACAGTTGGGTGAATTGGTTGTTCGTAACCCTTGTGTTGTTTTTGAGGAGTCTGGTGGTAGTGCATTCTCCCTGATTGCCTTTTTGATCAAATTTGGATTGTCCGTGAACAGGATTTCACTCATGTTTCTTGAGTTTCCACGGATTCGGGTAGGCAAGTTTCTGTCTAACTTAAGGCGGTGTTTACTGTTCTTTAGTGAGATTGAGATGCAGACTGTGGAGATTGCGAGGATTTTCCAGTCTCATTCGGCCCTGTTGGGTTCCTTCACTTTGAAGAGAACAACAAGTTTGCTTTGTAGCTTGAATGCTGGCAAGCAGCGGCTCTGTAAATTCGTGCGGGAGAATCCTGAGGAGATGAAGAAATGGGGTCTGGGATGTAAGATTGAGCCTTTGGGAAGAATTGAGAGGGAATCGAAGGTGTTGAAGGAACAGTTCTTGCTGAGCTTAGGATATGTGGAAAACTCAAAAAAAATGAATGAGGTGATCAAGTTGTTTAGAGGTAAGGGAGCTGGGCTTCAGGAGAGATATGAGTTTATTGTTAAAGTGGGCTTGGATGATGAGGTTGTCCGTAAAATGATTCGAGATTCCCCTCGGATTCTTAATCAATCCATAGATTCGATGAACATGAAAATTGGGGTACTTGTAAATGAAGGATATCCTATATCGGCTTTGGTGAATTTCCCTTCCTTTCTCTCGTATTCAACTCGAAGAGTTAAGCTTAGGTTTTCTATGTATAATTGGCTCAGAGACCATGGAGCTGCACAACGGGGGCTTGCCTTGAGCACTTTAATTGCATGCTCTGAGAAAGCATTTGTGCAGCTGTATGTGAATCGTCTTCCATCTGGCCTACAAGTTTGGCAGAATTTGAAGGCAGAAATTTCGTCTGAGGTTTAA 1665 0.4468 MIHFRKLNATPNPFRHKPSQNPRFQSTKSRTPESDAKIPGKATIKEVQAALLDYLHSTRSLQFLDADNMCKNSPFFLRDLFNKTLSQNPHVDTMRSIQRYLRYHPINEFEPFFESVGLKPSEYAPLLPRDMIYLNDDALLMENYHTLCNYGVPRPKMGKILKLAPLVFRYQSGVLMSKLRAYENLGVARTTLVAIVVSSPCILVGDVNIDFVKVVEKLKGVVAKDGDWVEGVLVNAGCCNWDLVLQLFCLLDKVFSAEQLGELVVRNPCVVFEESGGSAFSLIAFLIKFGLSVNRISLMFLEFPRIRVGKFLSNLRRCLLFFSEIEMQTVEIARIFQSHSALLGSFTLKRTTSLLCSLNAGKQRLCKFVRENPEEMKKWGLGCKIEPLGRIERESKVLKEQFLLSLGYVENSKKMNEVIKLFRGKGAGLQERYEFIVKVGLDDEVVRKMIRDSPRILNQSIDSMNMKIGVLVNEGYPISALVNFPSFLSYSTRRVKLRFSMYNWLRDHGAAQRGLALSTLIACSEKAFVQLYVNRLPSGLQVWQNLKAEISSEV* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1158 554 Gene3D Transcription termination factor 3, mitochondrial 72 275 IPR038538 -
Apr4g1158 554 Gene3D Transcription termination factor 3, mitochondrial 278 546 IPR038538 -
Apr4g1158 554 MobiDBLite consensus disorder prediction 13 33 - -
Apr4g1158 554 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 33 547 - -
Apr4g1158 554 MobiDBLite consensus disorder prediction 1 38 - -
Apr4g1158 554 SMART mt_12 333 361 IPR003690 GO:0003690|GO:0006355
Apr4g1158 554 SMART mt_12 193 224 IPR003690 GO:0003690|GO:0006355
Apr4g1158 554 SMART mt_12 447 477 IPR003690 GO:0003690|GO:0006355
Apr4g1158 554 SMART mt_12 158 188 IPR003690 GO:0003690|GO:0006355
Apr4g1158 554 SMART mt_12 478 511 IPR003690 GO:0003690|GO:0006355
Apr4g1158 554 Pfam mTERF 392 528 IPR003690 GO:0003690|GO:0006355
Apr4g1158 554 Pfam mTERF 255 423 IPR003690 GO:0003690|GO:0006355
Apr4g1158 554 PANTHER CGI-12 PROTEIN-RELATED 33 547 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1158 Apr-Chr4 9901534 9903235 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Apr4g1158 mTERF 5.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1158 - - gmx:100807690 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1158 4 9901534 9903235 Apr4g1158 4 9901534 9903235 ECH