Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1156 ATGTATCATGAATGTAGTCCCCGAATGTACGGGACTCAATGGGAATACTACAGGGGGATTAGCAACTTATCCAAGGTTGTTGGATCAGAACAGAGTTTTGAGCCCTCAAAATCATCCTCCAACATTGTAACAATTCCTTTTCAAACTCCACCAGGTTTTTGTCCAAGTACAGCCAAAGGCCTTGAGAGCTTTCAAGATCAAGAACATAAACATGATCAGCATCAGATTGAAGTTCCTTCTTGGTGCTTTGAGTTTCCAAAGACAGCAACAGATCTCGGAGATAACTTCACCAATACTACCACTAAACAAGATCAACCCACTTCTCAATTCACTAGCTCCTTGTACCCGGTTGCTGAATCTTACCTGTCTAGCAGTGCAGATTGTAATTCTTGTTCTGAAAATTATAGTAAATTTTCTTCTTGTTCTAAAAAACACAGTGATTTTCAGCCAGACAATATGCCATATTACGATCATATTTCACAAGAACATGATAAATTGCTGAGGGATGATGCTGCCACAGATGAGAGGCCCTTCGAAATTTCCTTTCAGAGAAACCAGTTACCATCATGTACAAAACTAGAAAAGCAGGTTCTTCATCGACCTTGTGGGGTTGCATGTGGCAATTCCAGCAACTCTGCTTCTAGGAGAGGTAAAAGAAGAATAAGATGGACCAAAGATTTGCATGAGCCATTTATGATGATTGTTAATAGTCTTGGTGGTCCCGAAAAAGCAAAGCCTAAGGCTATACTAGAGATGATGAAATCAGATTTGCTGTCCATTTCTCATGTTAAAAGTCATTTGCAGAAATGTAGGTCAACAATACAGATACCCAAAGCTTTGCTGGAAAGATCTGAGGAAGGACAAAGAACAAATGAGGTCAATGAGCTTCAAGTGAAAATCCACATGCAAATTGAGGAATCACGGCAACTCCAATTAGAAATCCGGAAGAGTATTGGCCAACAACTAGAGATGCAACGAAATTTGCAAATGCTAATTGAACAGCAAAGCAAGCAGCTCAAAGTAATGTTAGAGTACCAAAAGGAAAGAACCAAACTCTTGACACAGAATTGGAAGTGA 1077 0.3965 MYHECSPRMYGTQWEYYRGISNLSKVVGSEQSFEPSKSSSNIVTIPFQTPPGFCPSTAKGLESFQDQEHKHDQHQIEVPSWCFEFPKTATDLGDNFTNTTTKQDQPTSQFTSSLYPVAESYLSSSADCNSCSENYSKFSSCSKKHSDFQPDNMPYYDHISQEHDKLLRDDAATDERPFEISFQRNQLPSCTKLEKQVLHRPCGVACGNSSNSASRRGKRRIRWTKDLHEPFMMIVNSLGGPEKAKPKAILEMMKSDLLSISHVKSHLQKCRSTIQIPKALLERSEEGQRTNEVNELQVKIHMQIEESRQLQLEIRKSIGQQLEMQRNLQMLIEQQSKQLKVMLEYQKERTKLLTQNWK* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1156 358 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 218 272 IPR006447 GO:0003677
Apr4g1156 358 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 19 353 IPR044848 GO:0003700
Apr4g1156 358 Gene3D - 217 274 - -
Apr4g1156 358 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 19 353 - -
Apr4g1156 358 Coils Coil 293 313 - -
Apr4g1156 358 SUPERFAMILY Homeodomain-like 217 274 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1156 Apr-Chr4 9891809 9893993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1156 200 346 G2-like Transcription Factor Family AT4G28610 44.966 7.17e-32 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Apr4g1156 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1156 - - gmx:102662952 480.715