Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1146 ATGGGAATGGACAGAGCGCAATGTGCCTATAACGCTTTGGATGAAGCGTTCCAAATTGGAAAAGAAACGTATAGGGGGCAGCAATACAGCCAAATTTACTTCGCTCGCCTTCACTTGATGCGAACTCTCTTGTATTCTCTTATTCCCCATTGGAAACCTAATTTGACTGTATGCACGGTGTTGGGGTTGGAAGAGGGCAAGGAGTGTGTCATTGTTGGAACCCTCTATAAACACATGAACCTCAAACCTTCCGTACTTGATGAGTATTCTAAGAAGAGATCGGTGGTTCCACTTGTCAAGCTGCATAACTTTGTGCACCCAGACGATCACCTCGTTTTGGAAGATGAAAGCGGGAGGGTTAAGCTCAGTGGGAATCTCATTTCGCCATCTGAATATGTAACAGGGGCAGGTCACTTTTTGGTTCAGGATGTACTAGAGGCTGGCTTACCTCCACAGATAGAATTTCCCCTTAAATCAAGGGAAGACAAATTTGTTGTTCTTGTGTCGGGGTTAAGTGTTGGGAGCAGCAACGCTAATCCTCTTCAGTTTCAGCTTCTCATTGATCATATTACAGGGCATTTAGGAGATGAGAAGGAGCAAAGTATTGCTTCACAAATTGTTCATGTTGTTATTGCTGGAAATTCTGTTGAGATACCTCATGGGCTTCTCAATGGACAGAATTTGGCTTCAAAAGACCTCTCAAGGATGGCTGAGCCGATAAAGGAGCTAGATATTCTGTTGAATCAGATAGCTGCTGGTTTGCCTTTGGATATCATGCCTGGACCCAATGACCCTGCTAATTTCTCATTACCACAACAGTACTTTCAGCCATTGCATAGGTGCCTTTTCCCCGGGTCATCAGCATATAATACTTTTAGATCTTGTACAAATCCTCATTCTTTTGAGCTTGATAATGTCAGGTTTCTTGGGACATCAGGTCAAAATGTAGATGATCTTGAGAAGTATTCAGAGGCGAAAGATAAACTTGAATTCATGGAAAGGACATTAAGATGGAGGCATTTAGCACCCACTGCACCTAATACTCTTGGATGTTATCCTTATACTGATAAGGATCCATTTTTCATTGAGAGCTGTCCTCATGTTTACTTTGTTGGAAATCAGGATAAATATGAAACTCGTGTGGTAGAGGGAACAGAAGGGCAGTTGGTGAGACTTATATGTGTTCCTAAATTCAATGAAACGGGAATTGCCGTTATGCTAAATTTGAGGGACCTTGAATGTCATGCTCTTAGTTTTGGAACTCAGTTCAACTCATAA 1278 0.421 MGMDRAQCAYNALDEAFQIGKETYRGQQYSQIYFARLHLMRTLLYSLIPHWKPNLTVCTVLGLEEGKECVIVGTLYKHMNLKPSVLDEYSKKRSVVPLVKLHNFVHPDDHLVLEDESGRVKLSGNLISPSEYVTGAGHFLVQDVLEAGLPPQIEFPLKSREDKFVVLVSGLSVGSSNANPLQFQLLIDHITGHLGDEKEQSIASQIVHVVIAGNSVEIPHGLLNGQNLASKDLSRMAEPIKELDILLNQIAAGLPLDIMPGPNDPANFSLPQQYFQPLHRCLFPGSSAYNTFRSCTNPHSFELDNVRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPYTDKDPFFIESCPHVYFVGNQDKYETRVVEGTEGQLVRLICVPKFNETGIAVMLNLRDLECHALSFGTQFNS* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1146 425 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 4 419 IPR024826 -
Apr4g1146 425 Gene3D - 156 424 - -
Apr4g1146 425 Gene3D - 35 141 - -
Apr4g1146 425 Pfam DNA polymerase delta subunit OB-fold domain 28 136 IPR040663 -
Apr4g1146 425 CDD MPP_PolD2_C 164 419 IPR041863 -
Apr4g1146 425 Pfam DNA polymerase alpha/epsilon subunit B 165 377 IPR007185 GO:0003677|GO:0006260
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1146 4 424 Core DNA Replication Machinery Family AT2G42120 74.769 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1146 K02328 - gmx:100805951 767.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1146 4 9773647 9777714 Apr4g1146 4 9773647 9777714 ECH