Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1144 ATGTTTTCTTGGCTTGCAAGCTTGGTTTCTTCATGCCTGAGTCCTATGAGGCGCTATGCCCGCATGGGCAATGATGACACTAGTGATGATGGTTCTTCAACTGCTGAGCGGTCTCTTTTCTGGCGTAGAGACCTTGGGAAGCATTCTTGGGGTGAATTTTCCTTCGCTGTGATTCAGGCCAATGAAGTTATTGAGGATCATAGCCAGGTTGAGATAGGCTCTGATGCTATCTTTGTTGGAGTTTATGATGGCCATGGAGGTCCTGAGGCTTCCGTGTTCGTCAGGGATCACCTCTTCCAGCATCTAATGAGTATTGCTAAGGATAATGGTACTATCTCTGAAGAAACCCTCAGGGGTGCCGTTTCTGCTTCCGAGGATGGGTTTATGACTGTTGTCCGTAGGAGTTTTAGGATTAAAAAAGTGATTGCAACTGTGGGTTCCTGTTGTCTAATTGGTGTTATCTGGAAAGGGACCCTATATATCGCTAATGTTGGAGATTCCCGTGCTGTAATTGGTTCCATAGGTGGATCTAACAGGATCATTGCTGAGCAGTTGAGTAGAGAGCACAATGCCAATATAGAGGAGATTAGAGAAGAACTCAGGGCTTTGCATCCAGATGATCCAGATATTGTAGTCAAGAGCCGTGGAGCATGGCGCGTTAAAGGCATCATCCAGGTAACCAGATCCATAGGAGACGCATATTTGAAGCGGCCGCAGTTCGCTTTAGATTCGTCATTCCCACGCTTCCATTTGACTAAAAATATTACCAAAGCTGTGCTGACAGCAGAACCATCTGTAATGTCAAGAAATTTACAACCCCGTGACAGATTCATCATATTTGCATCAGATGGACTTTGGGAACTCTTGACAAATCAGGAAGCAGCTGACATTGTTCATAACAATCCGCGAAATGGGATTGCAAGAAGACTTCTTAAGACTGCTCTAAGGAAAGCAGCTAGAAGGGCGAATATGACATATAAACAGCTTCAGAAAGTTGAGAAAGGGAAAAGAAGGGATTATCATGATGATATCACTGTGATTGTTGTGTTCATAGATCATGGGTTGCTTGGGAAGAAACCTAAAGTACCAGAGTTGTCCATAAAAGGGTTCATGGCCTCGGATGGACAATCAAATTTTAAACAAATCCAGGAGCTTATGTGA 1161 0.4401 MFSWLASLVSSCLSPMRRYARMGNDDTSDDGSSTAERSLFWRRDLGKHSWGEFSFAVIQANEVIEDHSQVEIGSDAIFVGVYDGHGGPEASVFVRDHLFQHLMSIAKDNGTISEETLRGAVSASEDGFMTVVRRSFRIKKVIATVGSCCLIGVIWKGTLYIANVGDSRAVIGSIGGSNRIIAEQLSREHNANIEEIREELRALHPDDPDIVVKSRGAWRVKGIIQVTRSIGDAYLKRPQFALDSSFPRFHLTKNITKAVLTAEPSVMSRNLQPRDRFIIFASDGLWELLTNQEAADIVHNNPRNGIARRLLKTALRKAARRANMTYKQLQKVEKGKRRDYHDDITVIVVFIDHGLLGKKPKVPELSIKGFMASDGQSNFKQIQELM* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1144 386 Pfam Protein phosphatase 2C 74 319 IPR001932 -
Apr4g1144 386 ProSitePatterns PPM-type phosphatase domain signature. 78 86 IPR000222 GO:0043169
Apr4g1144 386 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 8 371 - -
Apr4g1144 386 SMART PP2C_4 44 349 IPR001932 -
Apr4g1144 386 SUPERFAMILY PP2C-like 55 352 IPR036457 -
Apr4g1144 386 Gene3D - 32 358 IPR036457 -
Apr4g1144 386 ProSiteProfiles PPM-type phosphatase domain profile. 52 351 IPR001932 -
Apr4g1144 386 PANTHER ALPHABET, ISOFORM E-RELATED 8 371 - -
Apr4g1144 386 CDD PP2Cc 53 351 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1144 Apr-Chr4 9763156 9765940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1144 1 379 PP2C-type Phosphatase Gene Family AT5G06750 61.340 8.22e-173 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1144 K01102 - gmx:100806476 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1144 4 9763156 9765940 Apr8g0754 8 7482154 7485806 PCT