Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1122 ATGGACAAGATCACTGAGAGAGAAACCCGTGACTTCATGAACGTTGATTCTTTCTCTCAGCTTCCCTTTATTCGCCCCGCGCCACCTTCTAAAGAAAAACCCATTCGACTCTTTGGAAAAGAGTTCACCGACGCGCCTGAGTCTCACTCTACCCAAACAACAACCCTCAACAACAACAACAGTTCCGAGAACGATACCAACAACAACAACAACGCGGAGAACAGTGAGAGTGGCCGTAGATTCGAATGCCATTACTGTTGTAGAAACTTCCCAACTTCTCAAGCCTTAGGTGGCCACCAGAACGCACACAAACGAGAGCGACAACACGCGAAACGACACCTCCAGGTTCAAAGCACCCTCTCAGATGCCAACATATACGGCTTCATGAACTACAGGTTCGCTGCTGCTCCTTCAACGGCAATGCCTTATCCAACGTGGAACACCAACACTGGAAGGTTCTATGGAAGCTCTTATGATTCCCATCAACTACAAACCATTAACGGAAGCCCCTTGGCCTTGTTGCGACTCCCCAATGCCACTACAACTCCCATATTCAACGGTGAACGCTCCTTGTATCCGTTGCCTTTGTTTGCTGGCGAGCAAATGAAGAACGCGAGGGTTGTGGGGTCGTCGAGGGTGGGTGCTTCTGGTTCTCAAAACCGGTATGTTTATGACTCCAAACCCAGCGTGAAGGACCATGTCAGTTTGGATCTTCATTTGTGA 723 0.491 MDKITERETRDFMNVDSFSQLPFIRPAPPSKEKPIRLFGKEFTDAPESHSTQTTTLNNNNSSENDTNNNNNAENSESGRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRHLQVQSTLSDANIYGFMNYRFAAAPSTAMPYPTWNTNTGRFYGSSYDSHQLQTINGSPLALLRLPNATTTPIFNGERSLYPLPLFAGEQMKNARVVGSSRVGASGSQNRYVYDSKPSVKDHVSLDLHL* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1122 240 PANTHER ZINC FINGER PROTEIN GIS 1 240 - -
Apr4g1122 240 SUPERFAMILY beta-beta-alpha zinc fingers 78 109 IPR036236 -
Apr4g1122 240 ProSitePatterns Zinc finger C2H2 type domain signature. 83 103 IPR013087 -
Apr4g1122 240 MobiDBLite consensus disorder prediction 45 75 - -
Apr4g1122 240 Pfam C2H2-type zinc finger 80 105 - -
Apr4g1122 240 ProSiteProfiles Zinc finger C2H2 type domain profile. 81 108 IPR013087 -
Apr4g1122 240 MobiDBLite consensus disorder prediction 43 75 - -
Apr4g1122 240 PANTHER ZINC FINGER PROTEIN GIS 1 240 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1122 Apr-Chr4 9498659 9499480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1122 1 240 C2H2 Transcription Factor Family AT2G41940 42.754 6.02e-48 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1122 - - aprc:113863688 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1122 4 9498659 9499480 Apr4g1122 4 9498659 9499480 ECH
Apr4g1122 4 9498659 9499480 Apr8g0742 8 7186407 7193554 PCT