Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1114 ATGGCTGGCAGTAATGAAGTCAACCTCAATGAATCAAGGAGTGTTGTTCCACTTAACACGTGGGTGCTTATCTCCAATTTCAAGTTAGCTTACAATCTTCTTAGACGAGCTGATGGAACATTTAATCGGGAGTTAGCAGAGTTTCTTGATCGAAAAGTCCCTGCCAATGCAAATCCCGTTGATGGGGTTTTCTCCTTTGATCATGTTGATAGAAACAATGGACTCTTCAATCGTGTGTACTTACCAGCTTCTGAAAGCGAGGCTCAATGGGGTATCAAAGATCTTGAAAGGCCATTGAGTACCACAGAGATTGTTCCTGTTATAATATTCTTTCACGGGGGAAGTTTTTCGCATTCTTCAGCAAATAGTGCTATCTATGACACCTTCTGTCGCCGCCTTGTGAGTATTTGTAAGGCTGTTGTCGTTTCAGTGAATTACCGGCGATCGCCGGAACATCGGTGTCCTTGTGCCTATGATGATGGTTGGGCTACATTGAAGTGGGTTAAGTCAAGAACATGGCTTCAAAGTGGAAGAGAATCGAAGGTTCATGTGTACATGGTAGGGGACAGTTCTGGTGGGAACATTGTTCATCATGTGGCTGTGAGGGCTGCTGAGGAAGAAGTTGAGGTAATGGGAAATATTCTTCTTCACCCATTGTTTGGTGGGGAGAAGAGAACCGAGTCAGAGATGAGATTGGATGGGAAGTACTTTGTGAGGCTTCAAGATCGTGATTGGTATTGGAGGGCTTTTCTACCTAAAGGAGAGGACAGAGACCATCCTGCTTGTAACCCTTTTGGCCCTAGAGGGAAAAGCCTTGCAGGAGTCAAATTTCCTAAAACTCTTGTTTGTGTTGCTGGTTTGGATCTTCTCCAAGATTGGCAATTGGCATATGTGAAAGCACGTTCGATAAATATGATTCGTCTGATAAAGTTGATGACAAATGTGAAGGCGGAAAAGAGAGTTTTGTGTATGCATAATAGTGTGACTTAG 990 0.4354 MAGSNEVNLNESRSVVPLNTWVLISNFKLAYNLLRRADGTFNRELAEFLDRKVPANANPVDGVFSFDHVDRNNGLFNRVYLPASESEAQWGIKDLERPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTFCRRLVSICKAVVVSVNYRRSPEHRCPCAYDDGWATLKWVKSRTWLQSGRESKVHVYMVGDSSGGNIVHHVAVRAAEEEVEVMGNILLHPLFGGEKRTESEMRLDGKYFVRLQDRDWYWRAFLPKGEDRDHPACNPFGPRGKSLAGVKFPKTLVCVAGLDLLQDWQLAYVKARSINMIRLIKLMTNVKAEKRVLCMHNSVT* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1114 329 Pfam alpha/beta hydrolase fold 108 299 IPR013094 GO:0016787
Apr4g1114 329 PANTHER GIBBERELLIN RECEPTOR GID1C-LIKE PROTEIN 2 312 - -
Apr4g1114 329 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Apr4g1114 329 Gene3D alpha/beta hydrolase 1 304 IPR029058 -
Apr4g1114 329 SUPERFAMILY alpha/beta-Hydrolases 58 300 IPR029058 -
Apr4g1114 329 PANTHER ARYLACETAMIDE DEACETYLASE 2 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1114 Apr-Chr4 9423142 9426458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1114 1 300 Carbohydrate Esterase AT3G63010 75.083 1.12e-175 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1114 K14493 - gmx:100788435 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1114 4 9423142 9426458 Apr4g1114 4 9423142 9426458 ECH
Apr8g0186 8 1498021 1502900 Apr4g1114 4 9423142 9426458 ECH
Apr4g1114 4 9423142 9426458 Apr8g0186 8 1498021 1502900 PCT