Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1109 ATGTGGCTGATCTTCCTCACCATAGTCCTCACTCTTCCAACCCTTTCCCTCTCCGTTCAATGTCCCCTCAACATCACCCTCCTCCGTTCATCACCCTCTTTTGGGGACCCCGTCACGCGCTGCCTTTACGTGATCCAAGCCCTCCGTATTCTTCAATCCGATTACCTCCGACGCACTGGATCCTTCTTCCCTCCACCCAACTCCACATTCTCTTGCTGGAACACTCTTCAATCCTTCATCAACCAATACGACATTCGCTCCTCTTGTAACCTTCCTTCCTCTTCTATTTCCCAAGCTTGCATGAACATCACTACCCGGTCACAGTTCCAAGCCTATGTTCCTGCCTCAGAACTTCAATCCGTGTCCGCTAATTGTAACCAATCTCTTGTTAATGATGCATCCTGTGCTCTCTGCACCGCTACGTTGTCCAAGGTGGAGTCGTACATCACTCCATCATCAGTCGATGATTGCAAAGCTATTGCTTCTATTTACGCCGGTTCTCTCTCCAATTTGGATAATCCTGCAATCGTTAAGTGCTTGTTCTTGATGGATCTGTATGGATCCAGTGGTAACAGTCACCGACTTGTTGTTATTGTCGTTTTTTCTACGTTGGCCTTGTTGTTGCTGGTTCTTGGTTCGTTTTGGGCTTATCTTAGATTGGGGCCCAAGAACAAGAAGGATGTTGGTAGAGGGGAGATGGGTTTGGGTTCGGTGAACCAAAGTACCACTTTGATTAGGTTCACTTTCGATGCCATTAAGAAGGCTACTAGGAATTTCTCTAGTGACAATATAATTGGGAGGGGGGGTTTTGGGAATGTTTATAAAGGTGTGTTATATGATGGGACTCAAGTTGCTTTGAAGAGGTTTAAGAATTGTTCGGTTTCTGGGGATGATAGTTTTGCTCATGAAGTAGAGGTTATTGCGAGTGTTAGGCATGTGAACCTTGTAGCCTTGAGAGGTTATTGTACTGCTACTACTAATTTAGAGGGTCACCAGAGGATTATTGTCACTGATTTGATGCAAAATGGGAGTCTTTATGATCATTTGTTTGGTTCTGCTAGGAAGAAATTGAGTTGGCCCATACGTCAAAAGATTGCTCTAGGCACTGCTAGGGGCTTGGCTTATTTGCATTATGGGGCTCAACCTTCCATCATTCATAGAGATATTAAAGCTAGTAACATACTTCTTGACGACATGTTTGAAGCCAAGGTAGCGGATTTTGGATTGGCAAAGTTTAATCCTGAGGGAATGACACATATGAGCACGAGGGTAGCTGGAACTATGGGGTACGTTGCTCCTGAGTATGCTTTGTATGGACAGTTGACTGAGAGAAGTGACGTGTTCAGTTTTGGTGTTGTGCTTCTTGAGCTTTTGAGTGGGAAAAAGGCTCTTCATGTGGACAACGATGGCCAACCTTCGGCACTCACCGACTTGGCTTGGTCATTGGTTAGAAATGATAGGGCTTTGGATGTTATTGAAGATGGTATGCAAGAACTTGGTCCGCCACAAGTTCTTGAGAAGTATGTGTTGGTAGCTGTAATTTGTTGTCATCCACAGTTATATGCTAGGCCAACAATGGATCAGGTAGTTAAAATACTGGAGACAGATGATGAATCAGTATCTTCAATAGTGGAAAGGCCAATCCCTTTTGAATCTGAAAGTAATAACTAG 1671 0.4434 MWLIFLTIVLTLPTLSLSVQCPLNITLLRSSPSFGDPVTRCLYVIQALRILQSDYLRRTGSFFPPPNSTFSCWNTLQSFINQYDIRSSCNLPSSSISQACMNITTRSQFQAYVPASELQSVSANCNQSLVNDASCALCTATLSKVESYITPSSVDDCKAIASIYAGSLSNLDNPAIVKCLFLMDLYGSSGNSHRLVVIVVFSTLALLLLVLGSFWAYLRLGPKNKKDVGRGEMGLGSVNQSTTLIRFTFDAIKKATRNFSSDNIIGRGGFGNVYKGVLYDGTQVALKRFKNCSVSGDDSFAHEVEVIASVRHVNLVALRGYCTATTNLEGHQRIIVTDLMQNGSLYDHLFGSARKKLSWPIRQKIALGTARGLAYLHYGAQPSIIHRDIKASNILLDDMFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSFGVVLLELLSGKKALHVDNDGQPSALTDLAWSLVRNDRALDVIEDGMQELGPPQVLEKYVLVAVICCHPQLYARPTMDQVVKILETDDESVSSIVERPIPFESESNN* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1109 556 Gene3D Transferase(Phosphotransferase) domain 1 340 546 - -
Apr4g1109 556 CDD STKc_IRAK 265 534 - -
Apr4g1109 556 ProSitePatterns Serine/Threonine protein kinases active-site signature. 384 396 IPR008271 GO:0004672|GO:0006468
Apr4g1109 556 PANTHER OS01G0253100 PROTEIN 17 553 IPR045271 GO:0004714|GO:0006468
Apr4g1109 556 Pfam Protein tyrosine and serine/threonine kinase 262 533 IPR001245 GO:0004672|GO:0006468
Apr4g1109 556 SUPERFAMILY Protein kinase-like (PK-like) 240 534 IPR011009 -
Apr4g1109 556 SMART serkin_6 259 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1109 556 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RKF3-RELATED 17 553 - -
Apr4g1109 556 ProSiteProfiles Protein kinase domain profile. 259 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g1109 556 ProSitePatterns Protein kinases ATP-binding region signature. 265 287 IPR017441 GO:0005524
Apr4g1109 556 Gene3D Phosphorylase Kinase; domain 1 228 338 - -
Apr4g1109 556 Pfam SPARK 18 150 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1109 Apr-Chr4 9357246 9358916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1109 21 550 Receptor kinase-like Gene Family AT2G48010 60.217 0.0 664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Apr4g1109 PK_Tyr_Ser-Thr 6.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1109 - - gmx:100819980 778.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1109 4 9357246 9358916 Apr8g0192 8 1551422 1554733 PCT