Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1055 ATGCCAAACAAGCTCAGAAGAAGTAGAAACAACCTTCGACTCAGACGCCTCAACCTATGTTTCTCAAATCCCATGCAGCCGTTCACACCTGAATCTCCCCCTGCAAGCCCCACACCTTCCTCATCATTTCTTCAACATCATTTTCATCACAGTCACAGCTGTCCATCATCACCACCCACCGCCACGTCATCAATCATTACCAGCACCGTCACCGCCGACCTCGCCACCGCCTTCGCCTCCCAACGCTTCTTCTTCTCCTCCCCCGGCCTCTCCAACTCCATCGTCGAATCCACCACCACCGACACCAATTGCACCTCATCTTCTTCCTCCTCGGTGATGGCCACCGCCCCTCCGACGCCGCCAGATGAATCTGCCACCGACGAGAAGGAAAAGAAGGTGCTGTTCAGCGGCAGTGTGGCGGTGCCGACCTACTCGCCGGACCCTTACGTGGACTTCCGGCGGTCCATGGAGGAGATGGTGGAGGCGCGTCCGGAGTTGATGGACGTGAAGTCCAACTGGCACGTGTTGCACGATCTTCTTCTCTGCTATCTTGCGCTCAACCCAGAGAGCACTCACAAGTTCATTCTCGGTGCTTTTACTGATCTTCTCGCTAACCTCATGTCCTTTTCTTTTTCTTCTTCTTCTTCTTCTTCTCCGTCGCCGGCGGTGGCGAGGGATGTTAGAGAATTTGATGAGCGTTGA 702 0.547 MPNKLRRSRNNLRLRRLNLCFSNPMQPFTPESPPASPTPSSSFLQHHFHHSHSCPSSPPTATSSIITSTVTADLATAFASQRFFFSSPGLSNSIVESTTTDTNCTSSSSSSVMATAPPTPPDESATDEKEKKVLFSGSVAVPTYSPDPYVDFRRSMEEMVEARPELMDVKSNWHVLHDLLLCYLALNPESTHKFILGAFTDLLANLMSFSFSSSSSSSPSPAVARDVREFDER* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1055 233 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 139 207 IPR006458 -
Apr4g1055 233 PANTHER TRANSCRIPTION REPRESSOR OFP12 34 214 - -
Apr4g1055 233 MobiDBLite consensus disorder prediction 24 61 - -
Apr4g1055 233 MobiDBLite consensus disorder prediction 97 117 - -
Apr4g1055 233 MobiDBLite consensus disorder prediction 211 233 - -
Apr4g1055 233 MobiDBLite consensus disorder prediction 38 61 - -
Apr4g1055 233 MobiDBLite consensus disorder prediction 97 130 - -
Apr4g1055 233 Pfam Transcriptional repressor, ovate 145 206 IPR006458 -
Apr4g1055 233 ProSiteProfiles OVATE domain profile. 141 205 IPR006458 -
Apr4g1055 233 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 34 214 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1055 Apr-Chr4 8750542 8751243 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Apr4g1055 Ovate 6.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1055 - - gmx:102663296 183.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1055 4 8750542 8751243 Apr8g0240 8 1895795 1896478 PCT