Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1035 ATGTCTAGTAGCCAAAATCTGAAATATGAGGGTAACTCATTTCTCATTGACATAACCAGTGTCCTTACCGATTTCACTGTCAATTACACCATTAACAAAGCCAAGAAAAGGTGGCGTTTTGCTTATACAGCAATTTATTCTAGACGGGTCATGCTTTCCCTTGCCAAGGAGGTCATATCAAAAAGAAACAGAAACACCCATCCCTACACAAAAATCTTCCAAACACAGTCTTCCACTTCCAGCAGCACTCTTAATATAGTTGAGCCCTTAGTTCCCCTTCATGTGAACAGTGGAGCCGATCATTATTGTTTGGTTCCTGATGTTGACAAAGCCAAACTTGTTAGTATGGTTAAAGACAAAAACTTGTTAGCCCTTACTGAGTTTGGAGGAGTTGAAGGTGTTGCAAATATTCTTGGAACCCTTCCAGCTAAGGGAATCCTTGGCAGTGATGATGATATTTCCAAACGAAGTGGATTGTTTGGTTCCAACACTTACCAAAGGCCACCACCCAAAGTCTTCGTACACTTTGTACTGGAAGCTTTGAATGACACTACTATCCTGATCCTTCTTGTTTGTGCTGGCCTTTCCCTTGGTTTTGGCATAAAAGAACATGGACCTGGGCAAGGCTGGTATGAAGGAGGGAGTATATTTGTAGCAGTGTTTCTGGTAGTGGTTGTCACTGCACTCAGCAACTTTAGACAAGAGAGACAATTTTACAAGTTGTCTAAGATAAGCAACAACATCAAAGTTGTAGTTGTGAGAAATGGAAGGCCACAGCAGATATCCATCTTTGAAGTTGTTGTGGGAGATATTGTTTCCCTTAAGATTGGTGACCAAATTCCAGCTGATGGACTGTTCCTAACTGGCCATTCTTTGCAAGTGGATGAATCAAGTATGACAGGTGAGAGCGATCATGTAGAAATTGAGCTTTTGAAGAGCCCCTTCTTGTTGTCTGGTGCAAAGGTGGTGGAGGGCTATGCTCAAATGCTTGTCACGTCTGTGGGAACTAACACTGCGTGGGGCCAAATGATGAGCTCTATATCCCGAGACACCAAGGAGAGAACACCATTACAAGCTCGCCTTGACAAGTTAACCTCTTCTATTGGAAAGGTAGGCCTTACGGTCGCTTTTCTTGTACTCATAGTCTTGTTCATTCGTTATTTCACTGGAAATACAGAAGATGATAATGGTAATAAGGAGTTCCAGGGTGGTAAAACCGATGTGAATGACATTTTCAATGCGGTTGTGCGTATTGTTGCTGCTGCAGTCACTATTGTGGTTGTGGCAATCCCTGAGGGTCTGCCATTGGCTGTCACTCTCACACTAGCTTACTCCATGAAAAGAATGATGGCAGACCAAGCAATGGTGAGGAAACTCTCTGCTTGTGAAACCATGGGGTCAGCAACAGTTATATGCACCGATAAAACCGGCACCTTAACTTTGAACCAGATGAGAGTGACAAAGTTTTGGCTAGGCCTAGAAAATGTTATTGAAAACTTTTCCAATGCAATGGCCCCTAATGTTCTCGAGTTATTCCACCAAGGAGTTGGCCTCAATACAACTGGCAGTGTCTATAAACCTTCATCAGAGTCTGAACCTGAAATTTCTGGTAGCCCAACAGAGAAAGCTATACTCCTTTGGGCTGTATCAGATTTAGGAATGGACATGGATGAACTGAAGCGCACACACAAAGTTCTTCATGTTGAAACATTTAACTCAGAGAAGAAACGAAGTGGAATTGCAATAAGGAAACAGACCAACAACACAGTTCACGTGCATTGGAAAGGCGCTGCAGAGATTATACTTGCAATGTGTTCTAATTATATTGATTGTAACGGCATAGAGAAGTCCCTTGATGAAGAGCGAAGTAAACTTGAGAAGATAATTCAAGGTATGGCAGCTAGTAGCCTACGATGTATTGCTTTTGCTCACATTGAGATTTCAGAAGATATTGATTACAACGATAAGGATGCACATCAGGTCCTAAGAAAAGATGGCTTGACCTTGCTAGGCATTGTTGGCCTCAAGGATCCATGCCGTCCTGATGTCAAGAAGGCTGTGGAAACTTGCAAACATGCGGGAGTTCATATCAAGATGATCACTGGAGATAACATATTCACTGCAAGAGCAATTGCAACAGAATGTGGAATATTAGATCTTGATGGCCATGTAAATGCAGGAGAAGTTGTGGAAGGTGTGGAGTTCAGAAACTATACAGAGGAAGATAGAATGGAGAAAGTTGACAAGATCCGTGTGATGGCCAGATCATCCCCTTTGGACAAACATTTGATGGTGCAATGCTTGAAGAAGAAAGGCCATGTAGTTGCAGTTACAGGAGATGGCACAAATGATGCACCCGCCCTAAAAGAAGCTGATATTGGACTTTCAATGGGGATCCAAGGAACTGAAGTTGCCAAGGAAAGCTCTGACATTGTTATCTTAGATGACAACTTCAGTTCTGTTGCCACTGTTTTGAGGTGGGGAAGATGTGTTTATAACAACATCCAGAAATTTATCCAGTTTCAACTAACCGTGAATGTTGCAGCTTTAGTGATAAACTTTATAGCAGCAGTTTCTTCAGGAGATGTTCCCCTTACAACAGTTCAACTATTATGGGTAAATCTCATTATGGATACTCTAGGAGCTCTTGCATTGGCTACAGAACGGCCTACAAAGGAGTTAATGCAGAAACAGCCAGTAGGTAGAACTGAACCTCTTATTACTAGTATTATGTGGAGAAACCTTTTAGCTCAAGCTTTATATCAGATTGCTATTCTGTTGGTTTTACAATTCAATGGCAAGTCAATCTTCCATGTAAATGAGAAGGTAAAGGATACTCTAATATTTAATATTTTTGTTCTCTGCCAAGTTTTCAACGAGTTCAACTCAAGAAGTATGGAGAAACTTAATGTATTCCAAGGTATTCACAAAAACCACTTGTTTCTTGGAATTGTGGGGATAACTGTTGTTCTTCAAGTTGTGATGGTGGAACTCCTAAGGAAGTTTGCTGATACAGAGAGATTAACATGGGAGCAATGGGGAATTTGTGTTGGAATTGCAGCTGTGTCATGGCCAATTGCATTGTTTATAAAGCTCATACCTGTTTCAGATAGACCGTTTTTCAGCCACACTAAGTGGGTAAAATTATTGGCCTTAAAGATTAAGCACGCTTTTTAA 3177 0.4133 MSSSQNLKYEGNSFLIDITSVLTDFTVNYTINKAKKRWRFAYTAIYSRRVMLSLAKEVISKRNRNTHPYTKIFQTQSSTSSSTLNIVEPLVPLHVNSGADHYCLVPDVDKAKLVSMVKDKNLLALTEFGGVEGVANILGTLPAKGILGSDDDISKRSGLFGSNTYQRPPPKVFVHFVLEALNDTTILILLVCAGLSLGFGIKEHGPGQGWYEGGSIFVAVFLVVVVTALSNFRQERQFYKLSKISNNIKVVVVRNGRPQQISIFEVVVGDIVSLKIGDQIPADGLFLTGHSLQVDESSMTGESDHVEIELLKSPFLLSGAKVVEGYAQMLVTSVGTNTAWGQMMSSISRDTKERTPLQARLDKLTSSIGKVGLTVAFLVLIVLFIRYFTGNTEDDNGNKEFQGGKTDVNDIFNAVVRIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACETMGSATVICTDKTGTLTLNQMRVTKFWLGLENVIENFSNAMAPNVLELFHQGVGLNTTGSVYKPSSESEPEISGSPTEKAILLWAVSDLGMDMDELKRTHKVLHVETFNSEKKRSGIAIRKQTNNTVHVHWKGAAEIILAMCSNYIDCNGIEKSLDEERSKLEKIIQGMAASSLRCIAFAHIEISEDIDYNDKDAHQVLRKDGLTLLGIVGLKDPCRPDVKKAVETCKHAGVHIKMITGDNIFTARAIATECGILDLDGHVNAGEVVEGVEFRNYTEEDRMEKVDKIRVMARSSPLDKHLMVQCLKKKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFSSVATVLRWGRCVYNNIQKFIQFQLTVNVAALVINFIAAVSSGDVPLTTVQLLWVNLIMDTLGALALATERPTKELMQKQPVGRTEPLITSIMWRNLLAQALYQIAILLVLQFNGKSIFHVNEKVKDTLIFNIFVLCQVFNEFNSRSMEKLNVFQGIHKNHLFLGIVGITVVLQVVMVELLRKFADTERLTWEQWGICVGIAAVSWPIALFIKLIPVSDRPFFSHTKWVKLLALKIKHAF* 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1035 1058 SUPERFAMILY HAD-like 470 883 IPR036412 -
Apr4g1035 1058 CDD P-type_ATPase_Ca_PMCA-like 153 911 - -
Apr4g1035 1058 SFLD p-type atpase 454 831 IPR044492 -
Apr4g1035 1058 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 479 675 IPR023299 GO:0000166
Apr4g1035 1058 Pfam Cation transporter/ATPase, N-terminus 129 196 IPR004014 -
Apr4g1035 1058 Gene3D - 482 678 IPR023299 GO:0000166
Apr4g1035 1058 PRINTS H+-transporting ATPase (proton pump) signature 625 643 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr4g1035 1058 PRINTS H+-transporting ATPase (proton pump) signature 778 794 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr4g1035 1058 PRINTS H+-transporting ATPase (proton pump) signature 810 835 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr4g1035 1058 SUPERFAMILY Calcium ATPase, transduction domain A 247 346 IPR008250 -
Apr4g1035 1058 Pfam E1-E2 ATPase 248 450 - -
Apr4g1035 1058 Gene3D - 469 823 IPR023214 -
Apr4g1035 1058 SUPERFAMILY Calcium ATPase, transmembrane domain M 128 1036 IPR023298 -
Apr4g1035 1058 PANTHER CALCIUM-TRANSPORTING ATPASE 24 1022 - -
Apr4g1035 1058 ProSitePatterns E1-E2 ATPases phosphorylation site. 474 480 IPR018303 -
Apr4g1035 1058 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 414 496 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr4g1035 1058 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 749 858 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr4g1035 1058 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 216 389 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr4g1035 1058 Gene3D - 179 1030 - -
Apr4g1035 1058 PRINTS P-type cation-transporting ATPase superfamily signature 295 309 - -
Apr4g1035 1058 PRINTS P-type cation-transporting ATPase superfamily signature 472 486 - -
Apr4g1035 1058 PRINTS P-type cation-transporting ATPase superfamily signature 671 682 - -
Apr4g1035 1058 PRINTS P-type cation-transporting ATPase superfamily signature 693 703 - -
Apr4g1035 1058 PRINTS P-type cation-transporting ATPase superfamily signature 778 797 - -
Apr4g1035 1058 PRINTS P-type cation-transporting ATPase superfamily signature 802 814 - -
Apr4g1035 1058 PANTHER CATION TRANSPORTING ATPASE 24 1022 - -
Apr4g1035 1058 Pfam haloacid dehalogenase-like hydrolase 470 792 - -
Apr4g1035 1058 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 122 1035 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Apr4g1035 1058 SFLD C1.7: P-type atpase like 454 831 - -
Apr4g1035 1058 Gene3D - 149 348 - -
Apr4g1035 1058 Pfam Cation transporting ATPase, C-terminus 863 1033 IPR006068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1035 Apr-Chr4 8530702 8534785 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1035 33 1045 Primary Pumps ATPases AT3G63380 69.132 0.0 1361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1035 K01537 - gmx:100790034 1805.8