Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1032 ATGGGTCTGGAAAAGGATCCTCGTATATTTTTAGATGTCTCAATTGATGGGGACCCTGTGGAAAGGATTTTTATTCAGCTTTTTGCCAGTATAGTTCCTAAAACAGCAGAAAATTTTCGGGCACTTTGTACAGGTGAGAAGGGCATTGGAGAATCGACTAGGAAACCTTTGCATTATAAAGGAACATGCTTTCATCGTATAATTAAAGGTTTTATGGCTCAAGGTGGTGATTTTTCAAGGGGCAATGGCACAGGCGGGGAAAGTATTTATGGAGGAAAGTTTGCAGATGAAAATTTCAAACTAACACATGATGGACCTGGCGTTCTTTCAATGGCTAATAGTGGTCCTAACACAAATGGATCTCAGTTCTTTATTACATTCAAGCGCCAACCTCATCTTGATGGGAAACATGTTGTTTTTGGAAAAGTTATCAAGGGAATCGACATTCTGAAGAAAATTGAGCAGGTGGGAACTTCTGATGGGAAACCCACCCAGCCAGTTAAAATTATTGATTGTGGTGAAGTCTCTGAAACAAAAGTTCAGCATACTGTTGAGAAGGAGAAAGGGAAAAAGAGAAAGTCAAGGAAATCCCTAACTTCTGATGATAGTTCTGACAAAAAATCAAGGGGGAAAAGAAAAAAATCTTCCAAAGACTCAAGGAAGAGAAGGAGGAGATACTCATCATCTGATAGTGATAATGGTAGTGATAGTTACTCCTCAGATTCTGAATCAGATTCAGATTCGGATTCTGAATCAGATTCATCATATTCTGATTCCAGTTCCTCTGGTTATGGGAAACACCAGAAGAGTAGGAGGAATAGGCACAAGCATGAGAAGAAGAGGAAAAATGGACGAAAGCTGAGAAGGAGAAGCCAGCACAGTAAAAGTAGAAGACCAAGACACAAGTCCAGACGGAGTTCAGATGATTCAAGTGATACAGAAAGTGATAGTTATAGTGATAGTAGTTCTGGTGATGAAAAAATTGAACGCCGTGCCTCTGGTCGTAAAACACGTGTTGACTATAAAGCACAAAGAAATCTAGATGCAGGAAAGCAATCTTCTAGCCTTCCTCAACGAAGTCCGGCTATTCCAGAACAAAAGTTGGAGGATCCCAAGGTTAGAAGAACTGTGGACAAGCAATCACATGAAGAAGGTGAATTATCTCCAGAAAATGGAGCATTTCTGAATAATGGGCATGATACTCGAGCTGAATTTAGTAAACCTGCTAAGCAACATGCTAATTCCGATGATTCAAATCACAATAGAGGTGGAAGTCCTGGGAGAAGTCCTGCTAGGAGTCCAACTAGGGATTCTACGGGGCTAAACCATGGACGTGCTTTGTTGTTGGCTAGTCCTGGTCAAAAGGCATCTGAACCTGCTGCCCCCAAACATAGTCAGCGATTTTCAAAGAGTCCTTCACCAAATGGCATGCCTAAGCGTATTAAAAAGGGCCGTGGCTTTACTGAGCGCTATGCATTTGCACGCAGATATCGAACTCCATCTCCAGAGCGATCTCCTCATACATATCGCTATGGTGATAGAAATATAAGAAGAAACTTTGACAGAAACACTAGCTATAGAAGTTATTCTGAACGCTCACCACCCAGACGTTACCGAAGCCCACCAGCGGGCAGGAACCGTCCAAGATACCAAGGCAGAAGAAGTCGGAGTAGGAGCATCTCCCGCAGTCCAGTGCGTGGCCGTATTAGGGACCGTGGCCGTAGCCGGAGTCCAATACGCAGTCTTAGCCCAGAAGACAGGCGGCCTCCCATTAGTGACAGATTAAAATCCCGACTTGGTCCCCGAAGTGATCAACGATCGGCAGACAGGGGTAGGTCAAAGTCCCATTCTAGGAGCAATGGCTCTTCTCGCTCCAGATCCCCTGATGCCACCCCACCAAAGCGATATGATAAAAGGACTTCTGTATCTCGAAGCAGGTCTAGATCTAGCTCTTCATCTGGACAAAAGGGTTTAGTTTCTTATGGAGATGCTAGTCCTGATTCTGGGCCCAGGTAG 2016 0.438 MGLEKDPRIFLDVSIDGDPVERIFIQLFASIVPKTAENFRALCTGEKGIGESTRKPLHYKGTCFHRIIKGFMAQGGDFSRGNGTGGESIYGGKFADENFKLTHDGPGVLSMANSGPNTNGSQFFITFKRQPHLDGKHVVFGKVIKGIDILKKIEQVGTSDGKPTQPVKIIDCGEVSETKVQHTVEKEKGKKRKSRKSLTSDDSSDKKSRGKRKKSSKDSRKRRRRYSSSDSDNGSDSYSSDSESDSDSDSESDSSYSDSSSSGYGKHQKSRRNRHKHEKKRKNGRKLRRRSQHSKSRRPRHKSRRSSDDSSDTESDSYSDSSSGDEKIERRASGRKTRVDYKAQRNLDAGKQSSSLPQRSPAIPEQKLEDPKVRRTVDKQSHEEGELSPENGAFLNNGHDTRAEFSKPAKQHANSDDSNHNRGGSPGRSPARSPTRDSTGLNHGRALLLASPGQKASEPAAPKHSQRFSKSPSPNGMPKRIKKGRGFTERYAFARRYRTPSPERSPHTYRYGDRNIRRNFDRNTSYRSYSERSPPRRYRSPPAGRNRPRYQGRRSRSRSISRSPVRGRIRDRGRSRSPIRSLSPEDRRPPISDRLKSRLGPRSDQRSADRGRSKSHSRSNGSSRSRSPDATPPKRYDKRTSVSRSRSRSSSSSGQKGLVSYGDASPDSGPR* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1032 671 MobiDBLite consensus disorder prediction 320 345 - -
Apr4g1032 671 MobiDBLite consensus disorder prediction 482 525 - -
Apr4g1032 671 MobiDBLite consensus disorder prediction 403 417 - -
Apr4g1032 671 SUPERFAMILY Cyclophilin-like 6 175 IPR029000 -
Apr4g1032 671 MobiDBLite consensus disorder prediction 179 671 - -
Apr4g1032 671 MobiDBLite consensus disorder prediction 645 659 - -
Apr4g1032 671 MobiDBLite consensus disorder prediction 365 386 - -
Apr4g1032 671 MobiDBLite consensus disorder prediction 347 361 - -
Apr4g1032 671 CDD cyclophilin_ABH_like 7 173 - -
Apr4g1032 671 MobiDBLite consensus disorder prediction 549 563 - -
Apr4g1032 671 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 20 173 IPR002130 GO:0000413|GO:0003755
Apr4g1032 671 MobiDBLite consensus disorder prediction 630 644 - -
Apr4g1032 671 MobiDBLite consensus disorder prediction 564 616 - -
Apr4g1032 671 MobiDBLite consensus disorder prediction 418 440 - -
Apr4g1032 671 MobiDBLite consensus disorder prediction 194 209 - -
Apr4g1032 671 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Apr4g1032 671 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Apr4g1032 671 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Apr4g1032 671 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Apr4g1032 671 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Apr4g1032 671 Gene3D - 2 182 IPR029000 -
Apr4g1032 671 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 4 416 - -
Apr4g1032 671 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Apr4g1032 671 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 4 416 - -
Apr4g1032 671 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 IPR020892 GO:0003755|GO:0006457
Apr4g1032 671 MobiDBLite consensus disorder prediction 267 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1032 Apr-Chr4 8502494 8508167 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1032 25 171 U-box Gene Family AT5G67530 48.322 1.30e-33 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1032 K09566 - gmx:100807327 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g1032 4 8502494 8508167 Apr4g1032 4 8502494 8508167 ECH