Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1025 ATGGAAACGCACGGTGGAGGACCCCTTCGTTCTCGCAGTTCACAGTCCCCTTCTCCCTCTCACTCTGCCTCCGCTTCCGCCACCTCTTCCATCCACAAGCGCAAGCTCGCGCCCGAGGATCACGCGCCTCTCTTCCCTCCCTCTTCCTTCTCCGCCGACACTCGCGATGGCGCCCTCACCTCCAATGACGATCTCGAGAGCATCTCCGCCCGCGGCGCCGACTCCGATTCCGACGATGACTCCGAGGACGCCGTCGTCGACGAGGACGAGGACGATTACGATAATGACAACGACTCCTCCATGCGCACCTTCAACGCCTCCAGGCTCAACAACCCTCCCTCCGCTCCTCGCAACACCAAGCTAAAGACCGATAACTCTAATGTCAAAATCGAAAACTCCGATGCCGCCAAAGACGCCGGAACCGCCGGCACTGGTGTTTCCACCACCGTCGGCTCCGTCACTGGCATCGTGGTTAAGGAGGACGCCACTAAGATTTTTACTGATAATTTGCAAACGAGTGGGGCTTATAGCGCCAGGGAAGAGAGTCTCAAGAAAGAGGAGGAAGCAGGAAGGCTCAAATTTGTATGTCTTTCGAACGATGGTGTTGATGAGCATATGGTTTGGAGCCATAAGTCAGTAATGGTTATAAGGCGTAATCATGTTGTTGGAGGCATTACATATCGCCCATATGCAAGCCAGAAGTTTGGTGAGATTGCCTTTTGTGCAATTACAGCTGACGAGCAAGTAAAAGGTTATGGTACCAGATTGATGAATCATCTAAAACAGTATGCACGGGATATAGATGGACTGACACATTTCCTCACATATGCTGACAATAATGCTGTTGGCTATTTTATCAAACAGGGATTTACTAAAGAGATTCACCTGGAGAAAGATCGATGGCAAGGTTATATAAAGGATTATGATGGAGGAATTCTCATGGAATGCAAGATAGATCCAAAGCTCCCTTACACTGATTTGTCAACTATGATTCGTCGTCAAAGGCAGGCAATTGATGAAAAGATCAGAGAGCTGTCAAACTGTCACATTGTTTATGCTGGAATTGATTTTCAGAAGAAAGAAGCTGGTATTCCTAAAAAAATTATTGATGACATACCCGGTTTGAGGGAGGCTGGATGGACTCCTGATCAGTGGGGTCATTCACGATTCAGAACTTTAAGTGGTTCTACTGATAGTGCGACAAATCAAAAACATTTGACTGTGTTTATGCGTTCACTTCTAAAGTCAATGAACGATCATGCTGATGCTTGGCCTTTCAAGGAACCAGTTGATGCACGGGATGTTCCTGACTATTATGACATCATAAAAGATCCAATGGATTTGAAGACAATGACTAAGAGGGTGGAGTCAGAGCAATATTATGTCACATTTGAGATGTTTGTTGCGGATGTCAGAAGAATGTTTGCGAATGCACGGACCTATAATTCTCCCGAAACCATTTATTTCAAATGTGCTGCAAGGTTAGAAGGTCACTTTCAAAGCAAAGTGCAAGCGGGTCTCCAATCTGGTTCCAAAATTCAGTAG 1545 0.468 METHGGGPLRSRSSQSPSPSHSASASATSSIHKRKLAPEDHAPLFPPSSFSADTRDGALTSNDDLESISARGADSDSDDDSEDAVVDEDEDDYDNDNDSSMRTFNASRLNNPPSAPRNTKLKTDNSNVKIENSDAAKDAGTAGTGVSTTVGSVTGIVVKEDATKIFTDNLQTSGAYSAREESLKKEEEAGRLKFVCLSNDGVDEHMVWSHKSVMVIRRNHVVGGITYRPYASQKFGEIAFCAITADEQVKGYGTRLMNHLKQYARDIDGLTHFLTYADNNAVGYFIKQGFTKEIHLEKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVYAGIDFQKKEAGIPKKIIDDIPGLREAGWTPDQWGHSRFRTLSGSTDSATNQKHLTVFMRSLLKSMNDHADAWPFKEPVDARDVPDYYDIIKDPMDLKTMTKRVESEQYYVTFEMFVADVRRMFANARTYNSPETIYFKCAARLEGHFQSKVQAGLQSGSKIQ* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1025 514 Pfam Bromodomain 411 493 IPR001487 GO:0005515
Apr4g1025 514 PANTHER BNAC04G26160D PROTEIN 9 207 - -
Apr4g1025 514 PANTHER BNAC04G26160D PROTEIN 209 514 - -
Apr4g1025 514 CDD Bromo_gcn5_like 406 505 - -
Apr4g1025 514 SMART bromo_6 399 508 IPR001487 GO:0005515
Apr4g1025 514 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 212 324 IPR016181 -
Apr4g1025 514 Pfam Acetyltransferase (GNAT) family 210 290 IPR000182 GO:0016407
Apr4g1025 514 CDD NAT_SF 212 266 - -
Apr4g1025 514 SUPERFAMILY Bromodomain 389 504 IPR036427 GO:0005515
Apr4g1025 514 MobiDBLite consensus disorder prediction 53 68 - -
Apr4g1025 514 MobiDBLite consensus disorder prediction 99 132 - -
Apr4g1025 514 Gene3D - 203 326 - -
Apr4g1025 514 PANTHER GH11602P 9 207 IPR037800 GO:0004402
Apr4g1025 514 PANTHER GH11602P 209 514 IPR037800 GO:0004402
Apr4g1025 514 ProSitePatterns Bromodomain signature. 423 481 IPR018359 -
Apr4g1025 514 PRINTS Bromodomain signature 421 434 IPR001487 GO:0005515
Apr4g1025 514 PRINTS Bromodomain signature 435 451 IPR001487 GO:0005515
Apr4g1025 514 PRINTS Bromodomain signature 470 489 IPR001487 GO:0005515
Apr4g1025 514 ProSiteProfiles Bromodomain profile. 418 489 IPR001487 GO:0005515
Apr4g1025 514 Gene3D - 391 510 IPR036427 GO:0005515
Apr4g1025 514 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 173 319 IPR000182 GO:0016407
Apr4g1025 514 MobiDBLite consensus disorder prediction 8 31 - -
Apr4g1025 514 MobiDBLite consensus disorder prediction 1 145 - -
Apr4g1025 514 MobiDBLite consensus disorder prediction 76 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1025 Apr-Chr4 8438187 8445547 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Apr4g1025 Bromodomain 1.2e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1025 K06062 - gmx:100791610 865.144