Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1022 ATGGCCAATAACCCTTCCGACACTCCCGCCGACGACTTCTTCGAACAAATCCTTGGCCTCCCGACCTTCGCTTCCGCCGACTCCGGCTTGGCTGCCGCCGATGTAGGCTTGGCCGGTACGGCTTCTCCGGCTCCGATGATGCTGCAGCTTAACTCCGCCGATGCCAACCCTCACCTCGCCGCCGGCGCTGCCTTTCATGCGCCCGTTTATCAGTTAGGGTTGAGCTTGGACCAAGGCAAAGGAGGCTTCATGAAGCCCGAGGATGCCTCTGCCAGCGGGAAGCGCTTTCGCGACGACGTCGTGGATGGCAGAGCTAAGAATGTTTTTCATGGGCAACCCATGCCAACAACTATGCCTGCTGCTCCACATCCTCCAGCAATACGTCCCAGGGTGCGGGCTAGAAGAGGACAGGCTACAGATCCACACAGCATAGCTGAACGGTTACGCAGAGAAAGAATAGCAGAAAGAATCAGGGCATTGCAAGAACTGGTTCCAAGTGTCAACAAGACAGATAGAGCTGCCATGTTAGATGAGATTGTGGATTATGTCAAATTCTTAAGGCTTCAAGTGAAGGTTTTGAGCATGAGTAGATTGGGTGGAGCCGGTGCAGTGGCACCACTGGTAACTGACATCCCATTATCATCAGTTGAGGAAGAAGGTGGTGAAGGTGCAAGAAACAGACCAGCTTGGGACAAGTGGTCAAATGATGGCACAGAAAGACAGGTAGCTAAGCTTATGGAAGAAAATGTTGGGGCTGCCATGCAATTTCTTCAATCAAAGGCACTCTGCATAATGCCCATCTCACTGGCTTCGGCAATATACCAGTCACAACCACCAGACACTTCTAGCATAGTCAAGCCTGAAACTAATCCTCCTTCATAG 882 0.5215 MANNPSDTPADDFFEQILGLPTFASADSGLAAADVGLAGTASPAPMMLQLNSADANPHLAAGAAFHAPVYQLGLSLDQGKGGFMKPEDASASGKRFRDDVVDGRAKNVFHGQPMPTTMPAAPHPPAIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGGEGARNRPAWDKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPPDTSSIVKPETNPPS* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1022 293 Pfam Helix-loop-helix DNA-binding domain 142 186 IPR011598 GO:0046983
Apr4g1022 293 Gene3D - 132 194 IPR036638 GO:0046983
Apr4g1022 293 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 282 - -
Apr4g1022 293 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 7 282 - -
Apr4g1022 293 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 137 186 IPR011598 GO:0046983
Apr4g1022 293 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 135 196 IPR036638 GO:0046983
Apr4g1022 293 SMART finulus 143 192 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1022 Apr-Chr4 8410417 8415005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1022 65 292 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 81.277 1.04e-121 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr4g1022 HLH 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1022 - - gmx:100797789 509.99