Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1013 ATGGCTCTTTCTGGGTCTGTCGTGGAGCTTCAAGCTTCTTCAATAAAGAAGAAAACTGCTGTTTCAAGAAGCTGGATTCTGCTGGACCATGATGGCAAAGGCACTGTACTTGATGTGGATAAGTATGCTATTATGCGATTGGTTAATATTCACGCAAGAGATCTTCGAATTCTGGACCCTCTCCTATCGTATCCTTCCACCATTCTCGGCAGAGAGAAAGCTATTGTTCTCAATTTAGAGCACATTAAAGCTATTATAACTGCGGATGAGGTATTGCTAAGAGACCCAACGGATGATGACGTGGTGCCAATTGTTGAAGAACTTCGCCGACGGTTACCCAAAGCAAATGCTTGTGGGCAAGGAGAAGAAGAGGCGTGTGTTCAAGATGGTGAAGGTGGACAGGAAAATGAATTTCCATTTGAGATCCGGGTCTTAGAAGTTATATTAGAGGCAATTTGTAGTTTCCTTGACGCACGAACAAGGGAGTTAGAGACCGCTGCTTATCCAGCTTTGGACGAATTGACCTCTAAGATTAGAGATGAACTAGAAAATCTACTTGATGATGACGATGACATGGTTGATCTTTACTTATCGAGAAAGTTGGCTGTTTCATCCTCACCCACAAGTAGCTCCGATGCTCCCAATTGGCTTTATAGCTCTCCAAATCCAAGTTCAAGAATACACAGATCTAGTAGAGCAAGTGGAACAATAGTTCAAAGAGACAATGATGTGGAGGAGCTTGAAATGTTACTTGAGGCCTATTTCATGCAAATTGATGGCACATTAAATAAATTGGCCACATTGCGAGAATATATTGATGACACAGAAGATTATATCAACATACAGCTTGACAATCATCGAAATCAACTGATTCAGCTAGAGCTCTTCATTAGTGCTGGGACTGTCTGTATGTCCATATATTCATTGGTGGCTGCAATATTTGGTATGAACATTCCATATACATGGAAAGAAGATCATGGATATATGTTTAAATGGGTGGTGATCTTTACGGGAATGGTTTGTGCATCCTTGTTTTTATCCATAGTATCTTACGCAAGACGCAAAGGCCTTGTTGGGTCTTGA 1083 0.4118 MALSGSVVELQASSIKKKTAVSRSWILLDHDGKGTVLDVDKYAIMRLVNIHARDLRILDPLLSYPSTILGREKAIVLNLEHIKAIITADEVLLRDPTDDDVVPIVEELRRRLPKANACGQGEEEACVQDGEGGQENEFPFEIRVLEVILEAICSFLDARTRELETAAYPALDELTSKIRDELENLLDDDDDMVDLYLSRKLAVSSSPTSSSDAPNWLYSSPNPSSRIHRSSRASGTIVQRDNDVEELEMLLEAYFMQIDGTLNKLATLREYIDDTEDYINIQLDNHRNQLIQLELFISAGTVCMSIYSLVAAIFGMNIPYTWKEDHGYMFKWVVIFTGMVCASLFLSIVSYARRKGLVGS* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1013 360 MobiDBLite consensus disorder prediction 204 234 - -
Apr4g1013 360 Pfam CorA-like Mg2+ transporter protein 236 346 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Apr4g1013 360 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 177 360 IPR039204 -
Apr4g1013 360 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 8 178 IPR039204 -
Apr4g1013 360 Gene3D - 8 96 - -
Apr4g1013 360 CDD Mrs2_Mfm1p-like 25 357 IPR039204 -
Apr4g1013 360 PANTHER MAGNESIUM TRANSPORTER MRS2-LIKE PROTEIN 8 178 - -
Apr4g1013 360 PANTHER MAGNESIUM TRANSPORTER MRS2-LIKE PROTEIN 177 360 - -
Apr4g1013 360 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 296 346 IPR045863 -
Apr4g1013 360 Gene3D Magnesium transport protein CorA, transmembrane region 178 290 - -
Apr4g1013 360 Gene3D Magnesium transport protein CorA, transmembrane region 103 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1013 Apr-Chr4 8320499 8325777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1013 1 333 MRS2 Gene Family AT5G64560 63.043 1.43e-143 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1013 K16075 - gmx:100799368 598.971