Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g1010 ATGGAGGAAGTTGAAGAAGCTAATAGAGCAGCTGTTGAGAGCTGTCATAGAGTTCTAACTATGTTGTCTCAGCCCCAAGATCAAGTTCAGTATAGGAATTTAAAGGTGGAAACAGGGGAGGCTGTATTGAGGTTCAGGAAAGTTGTTTCCTTGTTAGGTAGTGGTTTGGGTCATGCAAGAGTTAGGAAGCAAAAAAAACTTCAAATTCCTTTCTCTCAAAGTATCCTTTTGGACAACCCAAATTGCAAAACCGACCATTTGCATTTTCCTCAAACAAATTTTACTGACAATTCAGTTCAGGAATTGGGTCCAACAGTTAGAAATTCACTCTGTCTGGGAAACCCTTCTTTGGAATTGAGCTCCAATGGGAAAAGTCCTCTTCACCTTACCCAACAACCGTCATCAACACACTACCACATCCTTCAGCAGCAACAACAGAGGTTGTTGTTGCAGCAGCAGCAGCAGCAACAACAAATGAAACATCAAGCGGAAATGATGTTCCGAAGGAACAGTAGTGTCATAAATTTGAATTTCGATAGCTCTAGCTGCACGCCGTCAATGTCATCTACTAGGTCTTTCATTTCTTCCTTAAGCATAGATGGTAGCGTGGCTAACATGGATGGAAGTGCCTTCCATTTAATAGGAGCAGCACACTCTGATCAGAATTCACAGCAGCAGCACAAGAGAAAGTGTTCTGCCAGAGGTGAGGAGGGTAGTGTCAAGTGTGGGAGCAGTGCTAGATGCCATTGCTCAAAGAAGAGGAAACATAGAGTGAAAAGATCAATTAAAGTGCCTGCTATCAGCAACAAACTCGCAGATATCCCTCCTGATGATTATTCATGGAGGAAGTACGGGCAGAAACCAATCAAGGGATCACCTCACCCTAGGGGATACTATAAGTGCAGCAGCATGAGAGGGTGCCCTGCTAGGAAGCACGTAGAGAGGTGCTTGGAAGAGCCTTCCATGCTAATTGTTACTTATGAAGGCGACCACAACCATCCCAAGTTACCAGCACAATCTTCAAATGCATGA 1032 0.439 MEEVEEANRAAVESCHRVLTMLSQPQDQVQYRNLKVETGEAVLRFRKVVSLLGSGLGHARVRKQKKLQIPFSQSILLDNPNCKTDHLHFPQTNFTDNSVQELGPTVRNSLCLGNPSLELSSNGKSPLHLTQQPSSTHYHILQQQQQRLLLQQQQQQQQMKHQAEMMFRRNSSVINLNFDSSSCTPSMSSTRSFISSLSIDGSVANMDGSAFHLIGAAHSDQNSQQQHKRKCSARGEEGSVKCGSSARCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGDHNHPKLPAQSSNA* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g1010 343 SUPERFAMILY WRKY DNA-binding domain 273 335 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr4g1010 343 MobiDBLite consensus disorder prediction 218 238 - -
Apr4g1010 343 Pfam WRKY DNA -binding domain 277 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g1010 343 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 2 342 - -
Apr4g1010 343 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 342 IPR044810 GO:0003700
Apr4g1010 343 SMART WRKY_cls 275 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g1010 343 Pfam Plant zinc cluster domain 228 273 IPR018872 -
Apr4g1010 343 ProSiteProfiles WRKY domain profile. 270 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g1010 343 Gene3D WRKY domain 262 337 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g1010 Apr-Chr4 8289370 8292047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g1010 1 340 WRKY Transcription Factor Family AT2G30590 56.545 6.68e-126 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr4g1010 WRKY 7.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g1010 - - gmx:100170681 550.436