Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0999 ATGGAGAAGGGGGGAGAGAAAGACAATGGCGACTTGTATGGGGTTCTGGGGTTAGAGCATGAGTGCACCCAATCTGAGCTCAAGAATGCCTATAAGCAACTTGCACTGAAATGGCACCCAGATCGTTGTTCAGCGTCGGGTGTGGAAGAAGCAAAGAAGAAATTCCAGACAATTCAGCACGCATATTCTGTCTTATCTGACGCCAACAAAAGGTTCTTGTACGACGTAGGAGTGTATGACAGCGATGACGACCATAATGGCATGGGTGACTTCTTGAACGAAATGGCGACAATGATGAGCCAAACAAAACCCAATGAAAAGGGAGAGGAGAGCTTTGAGGAGTTGCAACAGCTCTTTGAAGAAATGTTTCAAGCGGATATTGGGTCAGCGGGAAGCACTTCTCAAACTGCTCCTGGTTGTTCTGCTTCATCTACGTACGCCACTTATAGTGACAGTTCCACTGAGATTAATTTTGGAAAGTCAGAGGATACATCTGATTTCAATTCTAGCTACCAGAACTTCTGTTTAGGGACAGGTGGAGCACCTTCAAGATCCCGCGAAGGAAAAGGGAACAACAGGAGGAGGAATTTGAGAATGAAGAGGAACTACATTTCATGGGAGAGGAAATTTCTTAGTATAGTTCGTATTATGTCACCAAATTCTCCTAGCCTCCTCCGCCCATGCCTCGCAAATGTATGA 699 0.4549 MEKGGEKDNGDLYGVLGLEHECTQSELKNAYKQLALKWHPDRCSASGVEEAKKKFQTIQHAYSVLSDANKRFLYDVGVYDSDDDHNGMGDFLNEMATMMSQTKPNEKGEESFEELQQLFEEMFQADIGSAGSTSQTAPGCSASSTYATYSDSSTEINFGKSEDTSDFNSSYQNFCLGTGGAPSRSREGKGNNRRRNLRMKRNYISWERKFLSIVRIMSPNSPSLLRPCLANV* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0999 232 CDD DnaJ 11 67 IPR001623 -
Apr4g0999 232 SMART dnaj_3 10 70 IPR001623 -
Apr4g0999 232 PRINTS DnaJ domain signature 13 31 IPR001623 -
Apr4g0999 232 PRINTS DnaJ domain signature 31 46 IPR001623 -
Apr4g0999 232 PRINTS DnaJ domain signature 50 70 IPR001623 -
Apr4g0999 232 Pfam DnaJ domain 11 75 IPR001623 -
Apr4g0999 232 SUPERFAMILY Chaperone J-domain 10 90 IPR036869 -
Apr4g0999 232 PANTHER PUTATIVE, EXPRESSED-RELATED 7 201 - -
Apr4g0999 232 Gene3D DnaJ domain 8 135 IPR036869 -
Apr4g0999 232 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 7 201 - -
Apr4g0999 232 ProSiteProfiles dnaJ domain profile. 11 78 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0999 Apr-Chr4 8180617 8183001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0999 13 75 C2H2 Transcription Factor Family AT1G74250 43.939 1.71e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0999 - - aprc:113861452 355.14