Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0996 ATGTGGTGGAGATCGGCATCATTCATCATGGACAGGCAGCAGAACGACGCCGCTTGGAAGGCCGACTCTTCCCACTCCATCACTCCTCCTCCGGCTTCCCCCACAAACGAATCCTCAATCTCAATCCTTAACCCTAACCCTAACCCTAACGCTAATCCTAGGATTTCAGCTTACTACCAGACGAGAGCGGCGCACCACGGCGTGGTGACAAGCGACTGGCTGGCTCAGGCTCAGGCGGCGATTGGGCCGGAGCCCGAACCCGAAGTGAAGCCCGATCCGGATAAGCCCTTCAGTGTGATCGACGAGTTTAATAACTGGCGGAAACAGCCACATTTGGCGGAAGCTGTCGCAGCCATTCGCGCCTTGGCCGCCGTCATAAGGTCGAGCGAGGCCACCACTATGATGGAGCTGGAAATCGAGCTCAAGAAGGCCTCCGATTCTCTCAAGGTAACACTAGTAGTAATACTCACTCACTCTATTTCTTCTTTCTTCGTTCATTTGCAATTGTTGATGTTTTTTTTTTGCTTTCATTTGCAGTCTTGGGATACAACTTCTATCTCTTTGACAGCTGGTTGTGATCTGTTTATGCGATATGTGACTAGAACTTCTGCTTTAGAGTATGAAAACTTTAATTCCGCAAAATCTCGCTTAATCGAACGTGCTGAGAAGTTTGGGGAAATCTCCTACAAGGCAACTTGCTTCCTCCCCTCCCGCTTTCACTGCATTCTAAGTTTATTTCCTCACACCTTCCTTTTTTTTTTTTTTTTGCAGGCTCGTAAAATTATTGCAATGTTGAGTCAAGAATTTATATTTGATGGTTGTACAATTTTGGTTCATGGTTTTTCCAGAGTTGTCTTTGAAGTTCTAAAGCTCGCAGCACAAAATAAGAAGCTATTTCGTGTCTTCTGCACAGAGGGAAGACCAGACCGAACGGGATTACGGTTGTCCAATGAGCTGGCCAAGCTTGATGTTCCTGTGAAACTTGTAATAGATTCTGCAGTTGCATATACTATGGATGTGGTGGACATGGTTTTTGTGGGTGCAGATGGAGTTGTGGAAAGTGGGGGCATAATCAACATGATGGGGACCTACCAAATTGCGTTGGTTGCACACAGTATGAATAAACCAGTCTATGTCGCTGCTGAAAGCTACAAGTTTGCTCGTCTTTACCCTCTTGACCAAAAGGATTTAGCCCCTGCTTTGCGCCCGATTGATTTCGGTGTACCTATTCCACCCAAGGTCGAGGTTGAAAGGTCTGCGCGGGACTACACTCCTCCTCAATATCTGACTCTGCTTTTCACAGATTTAGGTGTTCTTACTCCATCTGTTGTTAGTGATGAGCTGATCCAGCTATACTTATAG 1362 0.4655 MWWRSASFIMDRQQNDAAWKADSSHSITPPPASPTNESSISILNPNPNPNANPRISAYYQTRAAHHGVVTSDWLAQAQAAIGPEPEPEVKPDPDKPFSVIDEFNNWRKQPHLAEAVAAIRALAAVIRSSEATTMMELEIELKKASDSLKVTLVVILTHSISSFFVHLQLLMFFFCFHLQSWDTTSISLTAGCDLFMRYVTRTSALEYENFNSAKSRLIERAEKFGEISYKATCFLPSRFHCILSLFPHTFLFFFFLQARKIIAMLSQEFIFDGCTILVHGFSRVVFEVLKLAAQNKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLVIDSAVAYTMDVVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQKDLAPALRPIDFGVPIPPKVEVERSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0996 453 MobiDBLite consensus disorder prediction 17 47 - -
Apr4g0996 453 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 55 150 - -
Apr4g0996 453 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 257 453 - -
Apr4g0996 453 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 163 232 - -
Apr4g0996 453 SUPERFAMILY NagB/RpiA/CoA transferase-like 159 452 IPR037171 -
Apr4g0996 453 Gene3D - 96 227 IPR042528 -
Apr4g0996 453 Pfam Initiation factor 2 subunit family 257 441 IPR000649 GO:0044237
Apr4g0996 453 Gene3D - 257 453 IPR042529 -
Apr4g0996 453 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 55 150 - -
Apr4g0996 453 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 163 232 - -
Apr4g0996 453 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 257 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0996 Apr-Chr4 8134032 8136219 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0996 1 453 Eukaryotic Initiation Factors Gene Family AT1G53880 70.264 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0996 K03239 - gmx:100799015 620.157