Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0991 ATGGGTGACTCGTCGGTGGCAACTGATAAATTGGGTGACTCCCCAGCCATTAATTTAACCGGAAAGATAATGGTGGTGGTCACAATACTCCTCTTCTTCTTAGTTGTAATTATTCTCTTCTATCAGTTCTGTTCTAGAAGCTTATGGTCTGCAGACATCACTCGTTCCCAATCTCGGAGCCGCCGCCGCCGCCGCTTTTCCTTCGCCACTGGTCACGACGGTGCTCTTCGAAGGGGACTTGATCCCTCGCTCCTCAGGTCACTGCCCGTATTGGTATTCCAATCCCAAGACTTCAAGGATGGTTTGGAATGTGCCGTTTGCCTCTCTGAGCTTGTGGACGGAGAAAAGGCGAGGCTTTTGCCTGAATGCAATCACGGGTTTCACGTTTATTGCATTGATATGTGGTTCCAATCCCATTCGACTTGCCCTCTTTGCAGGAATGCCGTTGGCAGTGACTCCTCCAATAATGAAGTTGAACAAATAACTGAATCGTCGTCACGCGCAGATAACGTGGAATCACCCACTTTTCCCACAAACGTGTTGGTTTGGGGTGACCAGACCCAAATAAGTTCTACTGGTGGTCCTTCTTCGGAAGAAAGTGCTTCTCAGCCATCTTCTTCGGTGGCTGACAATAGACGTCAGGGAATGTTGGTGATTGATATACCCAATGAGATCACTTCAACCTCTTTGTCGCCTTCTGCAAGCAGGTTTGCGGAAGATGAACTTAAATCGCCAATGGCAGCGAGATTGAGGTCGTTGAAGAGGCTTTTAAGCAGGGATAGAAGGTTGAATCCTTGGAGTCCTAGTTCTGTAGATGTGGAACAAGCAGGCGGAGGACAGAGCTAG 846 0.4858 MGDSSVATDKLGDSPAINLTGKIMVVVTILLFFLVVIILFYQFCSRSLWSADITRSQSRSRRRRRFSFATGHDGALRRGLDPSLLRSLPVLVFQSQDFKDGLECAVCLSELVDGEKARLLPECNHGFHVYCIDMWFQSHSTCPLCRNAVGSDSSNNEVEQITESSSRADNVESPTFPTNVLVWGDQTQISSTGGPSSEESASQPSSSVADNRRQGMLVIDIPNEITSTSLSPSASRFAEDELKSPMAARLRSLKRLLSRDRRLNPWSPSSVDVEQAGGGQS* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0991 281 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 151 IPR013083 -
Apr4g0991 281 MobiDBLite consensus disorder prediction 259 281 - -
Apr4g0991 281 Pfam Ring finger domain 103 146 IPR001841 -
Apr4g0991 281 MobiDBLite consensus disorder prediction 150 212 - -
Apr4g0991 281 SMART ring_2 104 145 IPR001841 -
Apr4g0991 281 PANTHER RING-H2 FINGER PROTEIN ATL3 5 274 - -
Apr4g0991 281 CDD RING-H2_EL5_like 103 146 - -
Apr4g0991 281 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Apr4g0991 281 MobiDBLite consensus disorder prediction 263 281 - -
Apr4g0991 281 MobiDBLite consensus disorder prediction 150 243 - -
Apr4g0991 281 MobiDBLite consensus disorder prediction 221 235 - -
Apr4g0991 281 SUPERFAMILY RING/U-box 84 152 - -
Apr4g0991 281 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 5 274 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0991 Apr-Chr4 8102717 8103562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0991 59 264 C3H Transcription Factor Family AT1G53820 48.319 1.22e-61 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0991 - - zju:107434456 297.745