Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0986 ATGATGGAGCTTCCAAGTTTGCTGCTTCTGCTGTTCATCAGCACCTGCATTCTTCCATGGATGCCCAATGCTGGCGCTGCCACAGATCCAAGTGATGTTGCTGCTGTGAGGGCCTTGTTTCAAAATCTGAACTCACTATCTCAGTTAGGTTGGCCTGCTAACGGTGATGATCCATGTGGACAGTCTTGGAAAGGCATTACTTGCTCAGGCAACCGTGTTACGGAGATTAAGTTATCTAATCTTGGACTTACTGGAACCTTGCCTTATGGATTACAAGCCTTGACATCTTTGACCAACCTAGACGTGAGTAGCAACAGTCTTGGAGGCACCATACCATACCAACTTCCTCCATATGTGCAGCGCTTAAATATTGCTGATAATAACATCACTGGGACGGTCCCTTACTCTATCTCTAACTTGACCTCTCTTACTGACCTGAATCTTGGTCATAATCAGTTCCAGCAAGGACTGGGTGTTGACTTTCAAAATCTTTCTACCCTCTCCAAATTGGATCTCTCCTTCAATTCTTTTACAGGTGACCTCCCTCAGACTATGAGCTCACTTTCACGCATAACTACCATGTATCTGCAAAACAACCAGTTTACAGGCACTATTGATGTCCTTGCTAATCTGCCTCTGGATGATCTGAATGTGGAAAACAATAATTTTACTGGATGGATACCAGAACAGTTGAAAAAAATAAACCTACGGACTGCTGGTAATGCATGGAGCTCTGGACCTGCACCCCCACCTCCTCCTGGAACACCTCCAGCACCTAAAAGCAACAGACCCCACAAATCTGGTGGTAGAAGCACCACCCCCTCAGATGCTGGCGGTGGCTCAGTTGGTGAGGGCAAAAAATCTGGTATAGGAGGTGGGGGCATAGCTGGAATTGTGATATCTGTCATTGTCGTTGGGGCAATAGTAGCATTCTTTCTGGTGAAGAGAAAATCCAAGAAGTCATCTGCAGATTTAGAAAAGCTGGAGGATCCTCTTCCTTCGAATGAAGTGCATGAAGCAAAGACTGTGCAAACTTCCTCTGTAACTGACTTGAAGACATTTGATACTTCTGCCTCAATAAATCTTAAACCCCCACCTATTGATCGTCTTAAATCATTTGATGATGAAGAATTCTCCAAGAAGCCCACACATGTGAAGAAGACTGTTACAGCTCCTGCAAATGTAAAATCATATTCTATAGCTGAACTGCAGATTGCTACTAATAGTTTCAGTGTGGATCACCTTATTGGTGAGGGGTCTTTTGGGCGTGTGTACCGTGCTCAATTTGATGATGGAAAGGTTCTTGCAGTCAAGAAGATAGATTCATCTGTCCTTCCCAATGATTGGTCAGAAGATTTTACAGAAATAGTTTCAAATGTCTCCCACTTACATCATCCAAATGTGACAGAACTTGTAGGTTATTGTGCTGAGTATGGACAACACCTCTTAATATACGAGTTTCATAAAAATGGATCACTGCATGACTTCCTTCACCTATCAGATGAATATAGTAAACCATTGATATGGAATTCCCGTGTCAAGATTGCTCTGGGGACTGCACGTGCTTTAGAGTACCTACATGAAGTTTGTTCACCGTCAGTTGTGCATAAGAATATTAAGTCAGCCAACATATTACTTGATGCAGAGCTTAATCCTCATGTTTCAGACAGCGGATTGGCGAGCAATATTCCAAATGCAGAACAGATATTAAACCATAATGTTGGATCTGGATATGATGCACCTGAAGTTGCCTTGTCTGGTCAATATACTTTGAAAAGTGATGTCTACAGCTTTGGAGTTGTCATGTTGGAACTTCTCAGTGGACGGAAACCATTTGACAGCTCAAGGCCAAGATCTGAGCAGTCATTGGTTCGATGGGCAACACCTCAACTCCATGATATTGATGCATTGGCTAAAATGGTTGATCCTGCACTGAAAGGGCTATATCCTGTTAAGTCTCTTTCTCGATTTGCCGATGTTATTGCTCTTTGTGTTCAGCCGGAACCTGAATTCAGACCACCAATGTCAGAAGTGGTTCAAGCACTGGTAAGGTTAGTGCAGCGAGCTAACATGAGCAAGCGAACATTTAGTAGTAGTGATCTTGGAGGATCCCAACGAGGGAGTGATGAGCCAGCTCTACGGGACATCTGA 2151 0.4351 MMELPSLLLLLFISTCILPWMPNAGAATDPSDVAAVRALFQNLNSLSQLGWPANGDDPCGQSWKGITCSGNRVTEIKLSNLGLTGTLPYGLQALTSLTNLDVSSNSLGGTIPYQLPPYVQRLNIADNNITGTVPYSISNLTSLTDLNLGHNQFQQGLGVDFQNLSTLSKLDLSFNSFTGDLPQTMSSLSRITTMYLQNNQFTGTIDVLANLPLDDLNVENNNFTGWIPEQLKKINLRTAGNAWSSGPAPPPPPGTPPAPKSNRPHKSGGRSTTPSDAGGGSVGEGKKSGIGGGGIAGIVISVIVVGAIVAFFLVKRKSKKSSADLEKLEDPLPSNEVHEAKTVQTSSVTDLKTFDTSASINLKPPPIDRLKSFDDEEFSKKPTHVKKTVTAPANVKSYSIAELQIATNSFSVDHLIGEGSFGRVYRAQFDDGKVLAVKKIDSSVLPNDWSEDFTEIVSNVSHLHHPNVTELVGYCAEYGQHLLIYEFHKNGSLHDFLHLSDEYSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDAELNPHVSDSGLASNIPNAEQILNHNVGSGYDAPEVALSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRSEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTFSSSDLGGSQRGSDEPALRDI* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0986 716 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Apr4g0986 716 Gene3D Ribonuclease Inhibitor 118 245 IPR032675 -
Apr4g0986 716 Gene3D Phosphorylase Kinase; domain 1 372 487 - -
Apr4g0986 716 SUPERFAMILY L domain-like 28 231 - -
Apr4g0986 716 Gene3D Transferase(Phosphotransferase) domain 1 489 702 - -
Apr4g0986 716 Pfam Protein tyrosine and serine/threonine kinase 412 682 IPR001245 GO:0004672|GO:0006468
Apr4g0986 716 MobiDBLite consensus disorder prediction 245 260 - -
Apr4g0986 716 Pfam Leucine rich repeat 96 153 IPR001611 GO:0005515
Apr4g0986 716 MobiDBLite consensus disorder prediction 240 285 - -
Apr4g0986 716 MobiDBLite consensus disorder prediction 695 716 - -
Apr4g0986 716 SUPERFAMILY Protein kinase-like (PK-like) 388 682 IPR011009 -
Apr4g0986 716 Gene3D Ribonuclease Inhibitor 33 117 IPR032675 -
Apr4g0986 716 ProSiteProfiles Protein kinase domain profile. 410 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0986 716 PANTHER OS01G0253100 PROTEIN 23 710 IPR045271 GO:0004714|GO:0006468
Apr4g0986 716 ProSitePatterns Protein kinases ATP-binding region signature. 416 439 IPR017441 GO:0005524
Apr4g0986 716 CDD STKc_IRAK 416 685 - -
Apr4g0986 716 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 23 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0986 Apr-Chr4 8071430 8080364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0986 26 695 Strubbelig Receptor Gene Family AT1G53730 67.647 0.0 844
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Apr4g0986 PK_Tyr_Ser-Thr 1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0986 - - gmx:100807707 1196.42