Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0985 ATGGCTGAGGAACTGGATAAACCTTTGCTTGATCCTGAGAATTTCAACCGAGAGGGCATTGATTTGGAGCGCATACCATTAGAAGAAGTGTTTGAACAGTTGTGGACTTCACGAGGAGGACTGTCATCTGATGATGCTGAAGCCCGACTGCAAATATTTGGCCCAAACAAACTTGAAGAGAAGAAAGAGAATAAAATATTAAAATTTCTTAGTTTTATGTGGAATCCTCTGTCATGGGTTATGGAAGCAGCGGCATTGATGGCAATTATCCTTGCTAATGGCGGAGGGGAGGGTCCAGATTGGCAAGACTTTATAGGAATTATATGCCTACTGGTAATAAACTCAACTATTAGTTTTATAGAAGAAAATAATGCAGGTAATGCTGCAGCGGCACTAATGGCTCGTTTAGCTCCTAAAACAAAGGTTCTCAGAGATGGGCAGTGGCAAGAGCAAGACGCAGCTATTTTAGTACCCGGAGATATAATTAGCATAAAGCTAGGAGATATAATTCCAGCTGATGCTCGCTTGCTAGAAGGGGATCCTCTAAAAATTGACCAGGCAACTCTTTCTCTCACTGGAGAATCTCTACCTGTCACAAAGAAAACTGGTGACGAGGTATTTTCAGGTTCAACATGCAAACATGGAGAGATTGAAGCAGTAGTGATAGCAACAGGAGTTCACTCCTTTTTTGGGAAGGCAGCTCACTTGGTTGACAGTACTGAAGTTGTTGGACATTTTCAGAAGGTTCTTACCGCAATTGGTAACTTTTGCATTTGCTCTATAGCTATAGGGATGATTCTTGAAATAATTATAATGTTCCCAGTGGAGCATCGATCATACAGGGATGGAATCAACAACCTTCTTGTTCTCCTAATTGGAGGAATACCCATAGCTATGCCAACAGTATTGTCTGTAACACTTGCAATTGGCTCTCATCGGCTTTCTCAGCAGGGAGCTATCACAAAAAGAATGACAGCAATCGAAGAAATGGCAGGCATGGATGTCCTATGCAGTGACAAAACTGGAACTCTAACTCTGAACCGCCTGACTGTTGATCGAAACCTTATTGAGGTCTTTAACAAAAATATGGACAAGGATATGGTTGTTCTACTTGCAGCCAGGGCAGCTAGACTGGAAAACCAGGATGCAATTGATTCTGCCATTGTTAATATGCTAGCTGATCCAAAGGAGGCACGAGCAAACATCACTGAAGTTCATTTCCTACCATTCAATCCCGTAGATAAACGTACAGCTATAACATATATTGATTCTGAAGGAAATTTTTATCGGGCCAGTAAAGGAGCTCCAGAACAGATTCTAAATTTGTGTCAAGAGAAAGGCGAGATTGCCAGAAAAGTGCACATAATAATAGACAAATTTGCTGAAAGGGGATTGCGATCTCTTGCAGTTGCTTATCAGGAAGTTCCTGAAAAATCCAAGGATAGCCCAGGAGGTCCTTGGACTTTTTGTGGTTTGTTACCTTTGTTTGATCCACCAAGACATGATAGTGCAGAGACCATCCGAAGAGCACTTAACCTTGGAGTCTGCGTTAAGATGATTACAGGTGATCAGTTAGCAATTGCAAAGGAGACTGGCCGAAGACTTGGTATGGGGACAAATATGTATCCTTCTTCATCTTTGTTAGGTCATGAAAAAGATGAGAATGAAGCTCTCCCAGTAGACGAGCTCATTGAAAAGGCAGATGGCTTTGCTGGTGTATTTCCTGAACATAAGTACGAAATAGTGAAAATTTTACAAGAAAAGCAACATGTAGTTGGAATGACTGGGGATGGAGTAAATGATGCCCCAGCATTGAAGAAAGCAGATATTGGAATAGCTGTGTCAGATGCTACAGATGCTGCAAGAAGTGCTGCTGACCTGGTCTTAACCGAGCCTGGCTTAAGTGTGATTATTAGCGCTGTATTGACTAGCAGAGCTATATTTCAAAGAATGAAAAATTATACAATATATGCAGTCTCCATCACCATAAGGATAGTGCTTGGTTTTGCTCTCCTAGCATTGATTTGGGAGTATGATTTTCCACCCTTCATGGTCCTTATCATTGCAATACTAAATGATGGTACTATCATGACCATATCTAAAGACAGAGTAAAGCCATCCCCAACACCCGATAGTTGGAAACTGCCTGAGATATTTGCGACAGGAATCGTCATTGGCACTTATCTTGCTTTGGTTACTGTCCTATTTTACTGGGCAGTAGTTGAGACCACTTTCTTTGAGACCCACTTCCATGTAACCTCCTTATCCAGTGACAGCGAAGAAGTTTCATCTGCTATATATCTACAAGTTAGCATCATTAGCCAAGCTCTCATTTTCGTGACTCGTAGTCGTGGTTGGTCATTTCTAGAGAGACCCGGAATTCTATTGATGTGTGCCTTTGTAATAGCTCAACTGGTGGCCACCTTAATTTCTGTCTATGCACATATCAGTTTTGCTAAAATTAGAGGAATCGGATGGCGATGGGCTGGTGTTATATGGTTATACAGTTTAATCTTCTATGTACCATTGGACATCATTAAGTTCATAGTGCGCTATGCCTTGAGTGGAGATGCTTGGAATCTCCTATTTGACAGAAAGACTGCTTTTACATCTAAGAAAGACTATGGAACAGAAGATAGGGCTGCAAAATGGGTTCTTTCTCAGAGGAGTCTGCAAGGACTGAATCTGATGGCTGGAGGGTTTGAGGGCAATGGAAGGCGATCTTCTTTGATTGCTGAACAGGCCAGGCGACGTGCCGAAATAGCCAGATTAGGGGAGTTGCACACTCTCAGAGGACATGTGGAGTCTCTTGTGAGACTTAAGAAGTTAGACCGGAATTTGATCCAATCAGCTCATACAGTCTAA 2865 0.4192 MAEELDKPLLDPENFNREGIDLERIPLEEVFEQLWTSRGGLSSDDAEARLQIFGPNKLEEKKENKILKFLSFMWNPLSWVMEAAALMAIILANGGGEGPDWQDFIGIICLLVINSTISFIEENNAGNAAAALMARLAPKTKVLRDGQWQEQDAAILVPGDIISIKLGDIIPADARLLEGDPLKIDQATLSLTGESLPVTKKTGDEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTEVVGHFQKVLTAIGNFCICSIAIGMILEIIIMFPVEHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNKNMDKDMVVLLAARAARLENQDAIDSAIVNMLADPKEARANITEVHFLPFNPVDKRTAITYIDSEGNFYRASKGAPEQILNLCQEKGEIARKVHIIIDKFAERGLRSLAVAYQEVPEKSKDSPGGPWTFCGLLPLFDPPRHDSAETIRRALNLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGHEKDENEALPVDELIEKADGFAGVFPEHKYEIVKILQEKQHVVGMTGDGVNDAPALKKADIGIAVSDATDAARSAADLVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFALLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLPEIFATGIVIGTYLALVTVLFYWAVVETTFFETHFHVTSLSSDSEEVSSAIYLQVSIISQALIFVTRSRGWSFLERPGILLMCAFVIAQLVATLISVYAHISFAKIRGIGWRWAGVIWLYSLIFYVPLDIIKFIVRYALSGDAWNLLFDRKTAFTSKKDYGTEDRAAKWVLSQRSLQGLNLMAGGFEGNGRRSSLIAEQARRRAEIARLGELHTLRGHVESLVRLKKLDRNLIQSAHTV* 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0985 954 Gene3D - 349 496 IPR023299 GO:0000166
Apr4g0985 954 PANTHER CALCIUM-TRANSPORTING ATPASE 1 934 - -
Apr4g0985 954 PANTHER ATPASE 10, PLASMA MEMBRANE-TYPE 1 934 - -
Apr4g0985 954 SUPERFAMILY Calcium ATPase, transduction domain A 138 237 IPR008250 -
Apr4g0985 954 Pfam haloacid dehalogenase-like hydrolase 333 609 - -
Apr4g0985 954 ProSitePatterns E1-E2 ATPases phosphorylation site. 339 345 IPR018303 -
Apr4g0985 954 Pfam E1-E2 ATPase 136 316 - -
Apr4g0985 954 PRINTS P-type cation-transporting ATPase superfamily signature 187 201 - -
Apr4g0985 954 PRINTS P-type cation-transporting ATPase superfamily signature 337 351 - -
Apr4g0985 954 PRINTS P-type cation-transporting ATPase superfamily signature 491 502 - -
Apr4g0985 954 PRINTS P-type cation-transporting ATPase superfamily signature 513 523 - -
Apr4g0985 954 PRINTS P-type cation-transporting ATPase superfamily signature 595 614 - -
Apr4g0985 954 PRINTS P-type cation-transporting ATPase superfamily signature 618 630 - -
Apr4g0985 954 CDD P-type_ATPase_H 40 848 IPR006534 GO:0008553|GO:0016021|GO:0120029
Apr4g0985 954 SFLD p-type atpase 319 646 IPR044492 -
Apr4g0985 954 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 570 676 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr4g0985 954 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 107 544 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr4g0985 954 Gene3D - 138 224 - -
Apr4g0985 954 SUPERFAMILY HAD-like 333 642 IPR036412 -
Apr4g0985 954 Pfam Cation transporter/ATPase, N-terminus 25 87 IPR004014 -
Apr4g0985 954 Gene3D - 100 822 - -
Apr4g0985 954 SFLD Haloacid Dehalogenase 319 646 - -
Apr4g0985 954 Gene3D - 906 954 - -
Apr4g0985 954 SUPERFAMILY Calcium ATPase, transmembrane domain M 20 854 IPR023298 -
Apr4g0985 954 SMART Cation_ATPase_N_a_2 21 93 IPR004014 -
Apr4g0985 954 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 40 813 IPR006534 GO:0008553|GO:0016021|GO:0120029
Apr4g0985 954 Gene3D - 334 632 IPR023214 -
Apr4g0985 954 PRINTS H+-transporting ATPase (proton pump) signature 453 471 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr4g0985 954 PRINTS H+-transporting ATPase (proton pump) signature 567 583 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr4g0985 954 PRINTS H+-transporting ATPase (proton pump) signature 595 611 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr4g0985 954 PRINTS H+-transporting ATPase (proton pump) signature 626 651 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr4g0985 954 PRINTS H+-transporting ATPase (proton pump) signature 767 788 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0985 Apr-Chr4 8056518 8064843 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0985 1 954 Primary Pumps ATPases AT1G17260 80.818 0.0 1550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0985 K01535 - gmx:100795836 1637.47