Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0983 ATGGATCCTAAAGACTCCATTTTTCCCTTCTGGGGATCCGTACGGGGAACTCCCAGTTCCAGACAATTACCAACAAGTCTAATCCCATCATTATCTTCCATGTACATGGTCCTTGTCACAACACTGTTGCTTCTGTCATGGCTCCTTGTTCTTGTTGAAGCCTCCTCGTGTAACCAACAAGACAGAGACTCGCTATTGGCCTTCTCCGCGAACATATCCACGCCTTCTCCTCTCAATTGGTCTGCTTCTGTTGATTGCTGCACGTGGGAAGGCATTGCTTGTGATGGGGATCTCAGAGTCATCCATCTATTGCTACCATCCAGAGCCCTCAGTGGCTTCATCTTCCCATCTCTCACAAACCTCACTGCTCTCTCTCAGCTCAATCTCTCCCATAACAGCTTATCTGGTAATCTCCCAGACCGATTTTTCTCTCTTCTTAATCACCTGCAGATTCTTGATTTGAGCTACAATCGTCTCTCCGGTGAATTGCCACCCTTTGTTGCTGATATCAGTAGCAATACTATCGTGGAGCTCGATTTGTCTAGTAATTTATTCCACGGAACACTCCCACCTTCTCTTCTTCAGCAGCTAACGGGAGGGACTTTGACATCGTTTAATGTTAGTAACAATAGCTTCACGGGTCAAATTCCCACTTCTCTCCTATGCAGTAACCACAATAACTCCTCCTCTATCAGATTCATGGATTATTCCTCCAACCATTTTGATGGCATGATTCAGCCTGGACTCGGAGCATGTTCAAAACTGGAGAAATTTCGAGCAGGTTCCAATCTACTATCTGGGCCTCTTCCTGCTGATATTTTTAATGCTGTTGCTCTCACCGAAATCTCTTTGCCCCTCAATAAACTCAGTGGAACCATTGGTGAGGGAATTGTTAACCTTACCAACCTCACACTGTTGGAGCTCTACTCCAATAATTTCACGGGCCCCATTCCCCAGGATATTGGGAAGCTCTCCAAATTGGAAAGGTTACTTCTTCATGCCAACAATCTAACTGGTACTCTGCCCCCATCTCTAATGAACTGTACCAATCTTGTCATGTTGGATGTAAGGCTCAACTCCTTGGAGGGACAGCTCTCAGCATTGAATTTCTCCAGACTCCAGAGTCTCACAACACTTGACCTTGGCAACAATAGTTTTACGGGTATTTTGCCACCAACACTTTATGCCTGTAAATCACTTAAAGCAGTAAGGTTAGCATCTAATCAGATTGAGGGACAGATCTCACCTGACATACTTAGACTTCAGTCTCTGGCTTTCCTATCAGTTTCTACCAACAACCTGAGTAATGTCACTGGGGCTCTCACGCTACTCATGGGGCTCAAGAACCTTAGTACCCTTATGCTCTCCCAGAATTTTTTCAATGAAATGATGCCTGATGATGTAAACATCACACACCCAGATGGATTCCAAAAGATCCAAGTTCTTGGCTTGGGTGGTTGTAACTTCACGGGCCAAATACCACACTGGCTCGTTAATCTGAAGAAGCTTGAGGTTTTGGATTTGTCCTATAATCAAATTTCCGGTTCAATTCCTACTTGGTTGTACACACTTCCTGAACTTTTCTACATAGACTTGTCTTTTAACCACCTCACAGGAATATTTCCAACAGAGTTCACAAGGCTTCCAGCACTGACATCACAACGAACATATGATGGTGTAGAAAGGACTTACCTGGAGTTACCCCTCTTTGCTAATGCCAACAATGTTTCTCAGATGCAATATAATCAGATTTCTAACCTACCACCAGCAATATATCTGGGAAACAATAGCCTAAATGGCAGTATTCCCAAAGAAATTGGCCAACTGAAAGTCCTTCATCAGCTGGACCTTAGTTACAACCAATTCTCTGGCATTATTCCAGACGAAATTTCCAACTTGATTAACTTAGAGAAGCTATATCTAGCTGGAAACCAACTATCTGGTGAAATTCCTGCTTCACTCAAAAGCTTGCATTTTTTGTCTGTTTTCAGTGTAGCATTCAATGATCTTCAAGGACCGATACCAACTGGTAATCAATTTGATACTTTTCCTCCTTCAAGCTTTGAAGGAAACCCACAGTTGTGTGGTTCAGCTGTTCAGCGCTCCTGTCTTCCTCAGCAAGGTACTATTGCAGGTGGTCATCGCTCAAACAAAAAATTGATAGTTGGATTTGTCATTGCAGCCTGTTTTGGCACTGTTTCTTTCATTTCGGTGTTGATAGTGTGGATAATATCCAAGAGGAGGATCAATCCAGGAGGAGACACCGACAAGATTGAACTAGAATCAATTCCTGGCAACTCTAACAGTGGGGTTCATCCTGAGGTTGACAAGGAGGCTAGCCTAGTGGTATTGTTCCCTAATAAAACAAATGAAATCAAGGATCTTACCATATTGGAAATATTAAAAGCCACAGAAAATTTCAGTCAGGCAAACATAATAGGATGTGGGGGTTTTGGTTTGGTTTATAAAGCAACATTACCAAATGGAACTACTCTAGCTATCAAGAAACTTTCCGGAGATTTGGGTCTAATGGAAAGGGAATTTAAAGCAGAGGTAGAGGCTTTGTCGACAGCACAGCATGACAATCTGGTTGCATTGCAAGGCTATTGTGTGCATGAGGGCTTTCGACTTCTGATATATACTTACATGGAAAATGGAAGCCTGGATTACTGGTTGCATGAAAAGGCTGATGGTCCATCTCAACTTGATTGGCCTACTCGACTGAAGATTGCACAAGGTGCTAGCTGTGGACTGGCTTACATGCATCAGATATGCGAACCACATATAGTGCATCGTGATATAAAGTCAAGTAATATACTTCTTGATGATAAGTTTGAAGCACATGTTGCTGATTTTGGATTGGCCCGATTGATTCTTCCTTATCATACTCATGTTACAACTGAACTAGTAGGTACATTAGGTTACATTCCCCCAGAGTATGGACAAGCATGGGTGGCAACTCTGAGAGGAGATATCTACAGCTTTGGGGTTGTCATGCTTGAGCTGCTTACTGGGAGGAGGCCAGTCGATGTAAGCAAGCCAAAAATGTCAAGAGAGTTGGTTGTCTGGGTTCAACATATGAGGAGTGAAGGAAAACAAGATCAAGTATTTGATCCTCTTCTGAGAGGGCAAGGTTTTGAAGAACAGATGCTGCAGGTACTTGATGTAGCCTGCATGTGTGTCAGCCAGAATCCTTTCAAGAGACCAAGCATCAGAGAAGTTGTTGAATGGCTGCAGAACGTAGGATCATCCAACCTGCAAATGAATAAAGACTACATATAA 3282 0.4302 MDPKDSIFPFWGSVRGTPSSRQLPTSLIPSLSSMYMVLVTTLLLLSWLLVLVEASSCNQQDRDSLLAFSANISTPSPLNWSASVDCCTWEGIACDGDLRVIHLLLPSRALSGFIFPSLTNLTALSQLNLSHNSLSGNLPDRFFSLLNHLQILDLSYNRLSGELPPFVADISSNTIVELDLSSNLFHGTLPPSLLQQLTGGTLTSFNVSNNSFTGQIPTSLLCSNHNNSSSIRFMDYSSNHFDGMIQPGLGACSKLEKFRAGSNLLSGPLPADIFNAVALTEISLPLNKLSGTIGEGIVNLTNLTLLELYSNNFTGPIPQDIGKLSKLERLLLHANNLTGTLPPSLMNCTNLVMLDVRLNSLEGQLSALNFSRLQSLTTLDLGNNSFTGILPPTLYACKSLKAVRLASNQIEGQISPDILRLQSLAFLSVSTNNLSNVTGALTLLMGLKNLSTLMLSQNFFNEMMPDDVNITHPDGFQKIQVLGLGGCNFTGQIPHWLVNLKKLEVLDLSYNQISGSIPTWLYTLPELFYIDLSFNHLTGIFPTEFTRLPALTSQRTYDGVERTYLELPLFANANNVSQMQYNQISNLPPAIYLGNNSLNGSIPKEIGQLKVLHQLDLSYNQFSGIIPDEISNLINLEKLYLAGNQLSGEIPASLKSLHFLSVFSVAFNDLQGPIPTGNQFDTFPPSSFEGNPQLCGSAVQRSCLPQQGTIAGGHRSNKKLIVGFVIAACFGTVSFISVLIVWIISKRRINPGGDTDKIELESIPGNSNSGVHPEVDKEASLVVLFPNKTNEIKDLTILEILKATENFSQANIIGCGGFGLVYKATLPNGTTLAIKKLSGDLGLMEREFKAEVEALSTAQHDNLVALQGYCVHEGFRLLIYTYMENGSLDYWLHEKADGPSQLDWPTRLKIAQGASCGLAYMHQICEPHIVHRDIKSSNILLDDKFEAHVADFGLARLILPYHTHVTTELVGTLGYIPPEYGQAWVATLRGDIYSFGVVMLELLTGRRPVDVSKPKMSRELVVWVQHMRSEGKQDQVFDPLLRGQGFEEQMLQVLDVACMCVSQNPFKRPSIREVVEWLQNVGSSNLQMNKDYI* 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0983 1093 Pfam Leucine rich repeat 591 646 IPR001611 GO:0005515
Apr4g0983 1093 Pfam Leucine rich repeat 478 537 IPR001611 GO:0005515
Apr4g0983 1093 Pfam Leucine Rich Repeat 375 395 IPR001611 GO:0005515
Apr4g0983 1093 ProSitePatterns Serine/Threonine protein kinases active-site signature. 929 941 IPR008271 GO:0004672|GO:0006468
Apr4g0983 1093 SUPERFAMILY L domain-like 233 691 - -
Apr4g0983 1093 ProSiteProfiles Leucine-rich repeat profile. 502 525 IPR001611 GO:0005515
Apr4g0983 1093 Gene3D Ribonuclease Inhibitor 57 199 IPR032675 -
Apr4g0983 1093 SUPERFAMILY Protein kinase-like (PK-like) 791 1078 IPR011009 -
Apr4g0983 1093 SMART LRR_typ_2 146 169 IPR003591 -
Apr4g0983 1093 SMART LRR_typ_2 121 145 IPR003591 -
Apr4g0983 1093 SMART LRR_typ_2 421 443 IPR003591 -
Apr4g0983 1093 SMART LRR_typ_2 633 657 IPR003591 -
Apr4g0983 1093 SMART LRR_typ_2 447 470 IPR003591 -
Apr4g0983 1093 SMART LRR_typ_2 500 523 IPR003591 -
Apr4g0983 1093 SMART LRR_typ_2 609 632 IPR003591 -
Apr4g0983 1093 SMART LRR_typ_2 373 397 IPR003591 -
Apr4g0983 1093 SMART LRR_typ_2 524 547 IPR003591 -
Apr4g0983 1093 SMART LRR_typ_2 324 348 IPR003591 -
Apr4g0983 1093 Gene3D Ribonuclease Inhibitor 200 274 IPR032675 -
Apr4g0983 1093 Gene3D Ribonuclease Inhibitor 275 368 IPR032675 -
Apr4g0983 1093 ProSiteProfiles Protein kinase domain profile. 807 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0983 1093 Pfam Leucine rich repeat N-terminal domain 59 95 IPR013210 -
Apr4g0983 1093 PANTHER OS06G0692500 PROTEIN 40 1082 - -
Apr4g0983 1093 Gene3D Phosphorylase Kinase; domain 1 771 882 - -
Apr4g0983 1093 Gene3D Ribonuclease Inhibitor 369 709 IPR032675 -
Apr4g0983 1093 PRINTS Leucine-rich repeat signature 149 162 - -
Apr4g0983 1093 PRINTS Leucine-rich repeat signature 500 513 - -
Apr4g0983 1093 SUPERFAMILY L domain-like 80 314 - -
Apr4g0983 1093 Gene3D Transferase(Phosphotransferase) domain 1 883 1092 - -
Apr4g0983 1093 PANTHER LEUCINE RICH REPEAT KINASE 2 40 1082 - -
Apr4g0983 1093 Pfam Leucine Rich repeat 147 162 IPR001611 GO:0005515
Apr4g0983 1093 SMART serkin_6 807 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0983 1093 Pfam Protein kinase domain 808 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0983 1093 ProSitePatterns Protein kinases ATP-binding region signature. 813 836 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0983 Apr-Chr4 8039779 8043954 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0983 8 747 Miscellaneous Gene Families AT1G17250 50.397 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Apr4g0983 Pkinase 3.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0983 - - gmx:100782574 1848.17