Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0976 ATGTCACCAATTGTAATTTTTGTTGCTATTCTTGTGTGCTTGCCATTTTCTTGTTCCCTCCAACAGCAAGCGAAACTGCCACCAAACTCTTGCAATGAAACATGTGGAAACCTCCATGTTCCCTTTCCATTCTATGTCAACACTTCTTGTGACTCAATTTCCAGTACTTTCCATCTCTTATGCTCAAATTCCTCATCCCTTTTACTCAGAATTGGCTCAGTGAGCTTCACAGTCTTGGAATTTTTCTCTGATGGTGTACTGGTGGACTTTCCAGGATCATCATCATGCCGCCAGTACAATGACTTAAATTCTTTTGGCAAAAGTTTTCCAGGGAAAGAGCACTTTGGAGTATCAGTCGATAATGTTATTGGCCTTTATGACTGTGAGGATTCTTCTCTGTGCAAAGCTGATTGTGAAACCATTGACTTGCCTGGTTGTGATGGAAATGGTGGAGGCTCCCTTGCCTGCTGCTATCCACTCTCTGATCATTCCATATGGCATGTTGGAGATGGGTTTTCAGTGTTTTCTCAGTTTGGATGCAGGGGATTTTCTAGTTGGGCTGTTTTGAGAGGCTCAACTTGGGGAAAACGTGGGGTCAAGTTGGAATGGGCTCTTCCCAGAAACTCCTCCAGGGAAGTTTGTGCAAGCAATGCAAACATGGTCAATGCTACAGCAATTGAAGAAGGCATTCGATGTGTCTGTCAAAATGGATATGTTGGTGATGGTTTTGCTAATGGAACTGGATGTTTGCAGGCCTGCATAAAGGATGGAAGGGAAGCATATGGAAGTGACTGCTACATCCAAAGACATGATCAAAGGAAATTTGTTATCATTGCTGGAATCATTGGTCCAGTTCTTATTGTTGCCTCCCTGGTTGCACTATTTTGTCTTCTTAAAAGACAAGTAAAACCAGGGATGTTTGACCCTGAGCAGGCTTACTATCAAAACATTTCAATCCCCAAAGCTTGTAAAACTCGATTATTCAGCCTCCGTGAGCTAGAGGAAGCCACTAAAGGTTTTGAAGAGAGTCAGAAACTTATGCATGGCAATGATGGGACAATTTTTGCTGGAGTTTTTGGCGATGGATCTCACATAGCTGTCCACAAGCTACAATGTGAGAAGAAAGACTTAATTCAAGTCCTGTCACAAATCGAAGTTCTATCTGCTATGGTACATAGAAATATGGCCCGTCTTCTTGGATGCTGTATTGAATCTGGCAACACTCTTGTAGTTTATGAGTATCCTTGCAATGGAACCTTGGAGGAACATTTACATCAAAGCAAAGGACAAAAACTTGGTTTAGATTGGTATAGAAGATTGACTATTGCTGCAGAAACAGCTAGTGTTCTTGCATTCTTACACTATGAGAACTCTCCTCCCATATTTCACCATAACCTTAAATCTGCCTGCATCTTCCTAGATGATGATTATTCTGTAAAGATTGCAGGGTTTGGCCTGATCAACTCCAATTTTTACTATGCTTCACACTTGTGTAGCAACTACGAAGGCTTTGGCTTTGGCCTATGCAAAAATGATGTTTACGATATGGGTGTGTTGCTTCTTGAGATTATCTCTGGCTCAAATCACTCGGATCCACCAACTTTAGCCTTACAGCAAATAAGGGCTGGAAAATTTGAAGAAGTTTTTGATCCATTTCTTTGCTATCATGAACAACCACATTATCGCCAAGAGCAAATGCAAATAATTGCAGATCTTGCAACAAGATGCCTGTTATTTGGGGTGGATGGAAAGCTAGGAATGATTGATGTTGCGAGGGAGTTAGTACACATGACTAAAGAAAGTCCTGATGGAGGGATTCTGAGAGGACCTGCACTGGAGGAGACATTCTCAAATTCAAGCCTTCTCCAGATGATATCAATGTCTCCTGATTCTATGAATGTCCCTTGA 1908 0.4161 MSPIVIFVAILVCLPFSCSLQQQAKLPPNSCNETCGNLHVPFPFYVNTSCDSISSTFHLLCSNSSSLLLRIGSVSFTVLEFFSDGVLVDFPGSSSCRQYNDLNSFGKSFPGKEHFGVSVDNVIGLYDCEDSSLCKADCETIDLPGCDGNGGGSLACCYPLSDHSIWHVGDGFSVFSQFGCRGFSSWAVLRGSTWGKRGVKLEWALPRNSSREVCASNANMVNATAIEEGIRCVCQNGYVGDGFANGTGCLQACIKDGREAYGSDCYIQRHDQRKFVIIAGIIGPVLIVASLVALFCLLKRQVKPGMFDPEQAYYQNISIPKACKTRLFSLRELEEATKGFEESQKLMHGNDGTIFAGVFGDGSHIAVHKLQCEKKDLIQVLSQIEVLSAMVHRNMARLLGCCIESGNTLVVYEYPCNGTLEEHLHQSKGQKLGLDWYRRLTIAAETASVLAFLHYENSPPIFHHNLKSACIFLDDDYSVKIAGFGLINSNFYYASHLCSNYEGFGFGLCKNDVYDMGVLLLEIISGSNHSDPPTLALQQIRAGKFEEVFDPFLCYHEQPHYRQEQMQIIADLATRCLLFGVDGKLGMIDVARELVHMTKESPDGGILRGPALEETFSNSSLLQMISMSPDSMNVP* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0976 635 ProSiteProfiles Protein kinase domain profile. 340 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0976 635 SUPERFAMILY Protein kinase-like (PK-like) 322 594 IPR011009 -
Apr4g0976 635 Pfam Wall-associated receptor kinase galacturonan-binding 31 81 IPR025287 GO:0030247
Apr4g0976 635 PANTHER OS10G0351500 PROTEIN 40 630 - -
Apr4g0976 635 Gene3D Phosphorylase Kinase; domain 1 309 414 - -
Apr4g0976 635 Pfam Protein tyrosine and serine/threonine kinase 343 490 IPR001245 GO:0004672|GO:0006468
Apr4g0976 635 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 40 630 IPR045274 GO:0007166
Apr4g0976 635 Gene3D Transferase(Phosphotransferase) domain 1 416 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0976 Apr-Chr4 7962227 7964491 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0976 31 606 Receptor kinase-like Gene Family AT2G23450 30.449 8.51e-62 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Apr4g0976 PK_Tyr_Ser-Thr 2.7e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0976 - - gmx:100810557 1123.61