Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0975 ATGGACGCCTACTCCTCCGGAGAAGAAGTCGTTGTTAAGACTAGAAAACCATATACAATCACAAAGCAAAGAGAACGATGGACAGAGGAGGAACATAATAGATTTCTTGAAGCCCTGAAGCTATACGGGCGAGCATGGCAGCGCATAGAAGAGCATATTGGAACAAAGACTGCCGTGCAAATCAGAAGCCATGCACAGAAATTCTTTTCAAAGTTGGAGAAAGAAGCTCTTGTAAAGGGTGTTCCAATTGGACAAGCTCTTGACATAGACATCCCCCCTCCACGACCAAAAAGAAAACCGAGCAATCCTTATCCCCGTAAGACCAGTATTGGTACCTCAATATTACATAGTGGAGCAAAGCATGGAAAGTCTCTCATTTCAGTTGCATCTTCATTTGGTAAACAAGCACTGGACTTGGAGAAAGAACCATTTCCAGAGGAGGCAGCCTGTTTATCTGTATCTTCGGCAAACAAGAACTCAATGTCAGTGCCGCTGAGAAATTTATGTGCCTTAAGGGAGTTTATACCTTCAGAGAAAGATGTAACTCGAGATGAAACAAATGATTTTTTTGTGACTACTGAGCTTGAAAATCAGAAGTCGGAGACAGATGGTGGCAAGCACGCACAACAAAACAATGGCAGTTTTGAAGTCTCCGAGTTGGAGAACTCTGGTGCGTCCAAATTGGTGCAATCTGAGAAAAAAGATGGTCTTAATTGTGCGTTAACACTAGATGGAATGCAAGGCAGTCAGAATTTCCCAAGACATGTCCCTGTGCACGTAGTTGATGGGAACCTTGGAGCTAGTACTCAAAATCCATCCCAAAATATGTTGTTTCGAGACTCCATATTTCAGCCAATAGGAGGGGTAAATGGACAACCAAATCTTGTCACCAATTCTGCTACAGAAAACACAACTGAAAGTCAAAATAACACAGCACGATCCTCAATTCATCAATCATTTCCTCCTTGTCCTCCCTATACACAACATAATCAGGATGATTTCCAATCATTTCTTCACATGTCCTCCACATTTTCAAGTCTTATTGTCTCTACCACGCTGCAAAACCCTGCAGCTCATGCTGCAGCAAGTTTAGCTGCTACATTTTGGCCTTATGCAAATGCAGAAACTTCGGCAGACTCTTCCGTGTGTTCTAAAGGTTTTCCATCTGGTCAAATTGGCTCATCTCCAAGTGTGGCAACTATTGCAGCTGCTACAGTATCTGCTGCAACTGCATGGTGGGCTGCCCATGGACTGCTTCCTTTGTATGCTCCACTCCATGCAGCTTTTGCCTGTCCTCCTGCATCAGCAGTTACAGTTCCATCACCGAATATTGGTGAATCACCACAAAAAACAGAGCAAGGAGAAATTACACTACAAAACCCTCCCCTGCAAGATCAGGTACTGGATCCAGAACACTCAGAAGCTCTGCAAGCTCAACATTCAGCTTCTAAGTCACCAGTTGTTTCTTCATCGGAATCTGAGGAGATTGGGGATGTCAATTCAAATACTATATCAAAGGCTGATAATCATGAGATAAACCAAGAAATTTCCGAGCACCCTGATTCTAACAAAATGAAGGGAAGGAAACAGGTTGATCGTTCCTCATGTGGTTCCAACACAGCCTCCAGCAGTGAAGAGACTGAGGTACTAGAGAAGGATGAGAAAGAAAAGGAAGAGTTAAAGACAGCTGATGCAAACCATTTAGCTAATGAGCCTAGTAATCGTCGTAGTAGATGCATTAGCAACCTTACTGATTCTTGGAAGGAGGTCTCTGAAGAGGGGCGACTCGCCTTTCAGGCCCTATTCTCCAGGGAGGTGTTGCCTCAAAGCTTTTCACCTCCGCATGATTTGAAAAATAATGATAATCAGACGGACAACATCAAGGATAACAAACAAAGCACAGACTACAAAGATGAAGATCTTGACAGCAAGAAATGCAGTTCTAATTGTGCAGGGGTGCAGAAAAACCTGCCATTTGTGGAAAATAACAAAGAGGTGGAGGGACTGCTAACCTTAGGTCTTGGACAAGGAAAGCTAAAGACTCATCGAACAGGGTTTAAACCTTACAAAAGATGTTCGGTAGAGGCAAATGACAACAGGATCGGAATGGCCTGCAACGAAGAAGAGAAAGGTCCAAAGAGAATACGCTTGGATAGGGAGGCTTCAACTTGA 2172 0.4346 MDAYSSGEEVVVKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGVPIGQALDIDIPPPRPKRKPSNPYPRKTSIGTSILHSGAKHGKSLISVASSFGKQALDLEKEPFPEEAACLSVSSANKNSMSVPLRNLCALREFIPSEKDVTRDETNDFFVTTELENQKSETDGGKHAQQNNGSFEVSELENSGASKLVQSEKKDGLNCALTLDGMQGSQNFPRHVPVHVVDGNLGASTQNPSQNMLFRDSIFQPIGGVNGQPNLVTNSATENTTESQNNTARSSIHQSFPPCPPYTQHNQDDFQSFLHMSSTFSSLIVSTTLQNPAAHAAASLAATFWPYANAETSADSSVCSKGFPSGQIGSSPSVATIAAATVSAATAWWAAHGLLPLYAPLHAAFACPPASAVTVPSPNIGESPQKTEQGEITLQNPPLQDQVLDPEHSEALQAQHSASKSPVVSSSESEEIGDVNSNTISKADNHEINQEISEHPDSNKMKGRKQVDRSSCGSNTASSSEETEVLEKDEKEKEELKTADANHLANEPSNRRSRCISNLTDSWKEVSEEGRLAFQALFSREVLPQSFSPPHDLKNNDNQTDNIKDNKQSTDYKDEDLDSKKCSSNCAGVQKNLPFVENNKEVEGLLTLGLGQGKLKTHRTGFKPYKRCSVEANDNRIGMACNEEEKGPKRIRLDREAST* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0975 723 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Apr4g0975 723 MobiDBLite consensus disorder prediction 609 641 - -
Apr4g0975 723 MobiDBLite consensus disorder prediction 297 325 - -
Apr4g0975 723 SMART sant 23 71 IPR001005 -
Apr4g0975 723 PANTHER PROTEIN LHY 147 706 - -
Apr4g0975 723 PANTHER PROTEIN LHY 2 148 - -
Apr4g0975 723 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Apr4g0975 723 MobiDBLite consensus disorder prediction 473 575 - -
Apr4g0975 723 MobiDBLite consensus disorder prediction 546 565 - -
Apr4g0975 723 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Apr4g0975 723 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Apr4g0975 723 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Apr4g0975 723 MobiDBLite consensus disorder prediction 511 531 - -
Apr4g0975 723 Gene3D - 26 73 - -
Apr4g0975 723 MobiDBLite consensus disorder prediction 88 115 - -
Apr4g0975 723 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Apr4g0975 723 PANTHER SWI/SNF COMPLEX-RELATED 147 706 - -
Apr4g0975 723 PANTHER SWI/SNF COMPLEX-RELATED 2 148 - -
Apr4g0975 723 MobiDBLite consensus disorder prediction 621 641 - -
Apr4g0975 723 CDD SANT 26 69 IPR001005 -
Apr4g0975 723 Coils Coil 543 563 - -
Apr4g0975 723 MobiDBLite consensus disorder prediction 476 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0975 Apr-Chr4 7951145 7958111 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Apr4g0975 Myb_DNA-binding 2.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0975 K12133 - gmx:778086 1037.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0975 4 7951145 7958111 Apr4g0975 4 7951145 7958111 ECH