Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0974 ATGGCGAGCGTTCCGAATTCGAAATTAGCAGTAGCAGCAGCAGATTTAGAAGATGAAGAAAGCTTCGCGTATGCTTCACAGCTTGGAAGCTCCGTAGTGCTTCCCATGGCACTTCAATCCGCGAGTGAGTTGGGAGTATTTGACGTATTGCAAAAAGCGGGTGCTGATGCTAAGCTATCAGCAAAGGATATTGCGTCACAGCTTTCGTGCGAAAACCCACAAGCTCCCTCAATGCTAGATCGTATCCTCGCCCTTCTTACCTCTCACTCCATTCTCATCTGTTCCCTCATTCCCGACCACCAAAACATTGGATCCTTTCTCAGACTCTACACCATCACTCCGGTAGCCAAGTTCTTTGCTCGCAACTCCGATGGAGTTTCCTTGACCCCCTTGATGGCTTTGATTCAAGATCAAGTCTTCCTCCAAAGCTGGTCCGCGCTGAAAGATGCAATTAAGGAAGGGGGTATTCCATTCAACAGGGTTCATGGCACTCATGCTTTTGAGTATCCAAACTTGGACTCAAGGTTCAATCAAGTTTTTAATGCAGCAATGGTCGGTAACACCACTCTAGTGATGAAGAAGGTTCTGGAATGCTACAAAGGTTTTGGGGATATAAAAAGGCTTGTGGATGTTGGCGGTGGTCTTGGGATCAACATCAACATGATCATTTCCAAATACCCTCATATCCAGGGTATCAATTTCGACCTGCCTCATGTCATAGAACATGCCCCTTCCTATCCTGGAGTGGAGCACGTTCGTGGAGATATGTTTGAAAGTGTACCAAAAGGAGATGCCATCTTTCTGAAGTGGATACTTCATGATTGGAGTGATGAGCACTGTTTGAAGCTGTTGAAGAATTGCTATGATGCCATTCCTGATGATGGGAAAGTGATTCTTGTGGAGGCAGTTCTTCCAATAATACCAGAGACTAATACTTCTTGGAGGTCCGTTTCCCAAACTGATGTTCTGATGATGACTCAAAACCCCGGTGGGAAAGAGCGAACTGAGCAAGAATTCTTGGAATTGGCAACTTCTGCTGGATTTAGTGGAATCAGATATGAATGCTATGTTCGCACCTTCTGGGTTATGGAGTTCTTCAAGTAG 1104 0.4547 MASVPNSKLAVAAADLEDEESFAYASQLGSSVVLPMALQSASELGVFDVLQKAGADAKLSAKDIASQLSCENPQAPSMLDRILALLTSHSILICSLIPDHQNIGSFLRLYTITPVAKFFARNSDGVSLTPLMALIQDQVFLQSWSALKDAIKEGGIPFNRVHGTHAFEYPNLDSRFNQVFNAAMVGNTTLVMKKVLECYKGFGDIKRLVDVGGGLGININMIISKYPHIQGINFDLPHVIEHAPSYPGVEHVRGDMFESVPKGDAIFLKWILHDWSDEHCLKLLKNCYDAIPDDGKVILVEAVLPIIPETNTSWRSVSQTDVLMMTQNPGGKERTEQEFLELATSAGFSGIRYECYVRTFWVMEFFK* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0974 367 Gene3D Vaccinia Virus protein VP39 120 367 IPR029063 -
Apr4g0974 367 PANTHER O-METHYLTRANSFERASE 18 367 IPR016461 GO:0008168
Apr4g0974 367 SUPERFAMILY "Winged helix" DNA-binding domain 17 122 IPR036390 -
Apr4g0974 367 Pfam Dimerisation domain 36 87 IPR012967 GO:0046983
Apr4g0974 367 PIRSF O-mtase 3 367 IPR016461 GO:0008168
Apr4g0974 367 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 18 367 - -
Apr4g0974 367 Pfam O-methyltransferase domain 144 349 IPR001077 GO:0008171
Apr4g0974 367 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 367 IPR016461 GO:0008168
Apr4g0974 367 Gene3D - 2 119 IPR036388 -
Apr4g0974 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 365 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0974 Apr-Chr4 7940817 7947365 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0974 1 367 Monolignol Biosynthesis Gene Families AT5G54160 52.446 2.52e-140 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0974 K13066 - gmx:100803633 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0974 4 7940817 7947365 Apr4g0974 4 7940817 7947365 ECH