Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0967 ATGGGTGAAGTGGCGGCTCACAAGGGGTTGATACCGACGCAGGAGGACCAAACCAACAGTGCCTCCGCGGTTCGGTGGGAGAGGTTTCTGCCTCGGATGGTGCTTCGGGTGTTGCTTGTCGAAGCTGATGATTCTACTCGCCAGATCATTGCTGCCCTTCTCCGTAAATGCAGTTACAGAGTTGCTGCAGTTCGTGATGGATTAAAGGCATGGGAGACATTGAAGAACAAAGCAGATGACATAGATCTCATATTAACAGAAGTGGATTTGCCATCAATATCTGGATTTTCACTTCTTACTTTAATCATGGAGCATGACACTTGCAAAAACATTCCTGTCATAATGATGTCTTCTCATGATTCTGTTAGCATGGTGTTCAAATGCATGTTAAAAGGGGCAGCTGATTTTCTTATAAAACCTGTTCGTAGGAATGAGCTAAGAAACTTGTGGCAGCATGTATGGAGAAGGCATGCTATTAGCAAGCCTCCTGAAAATTTAACATTACCACAGATCAAACTTGATGTTGCTGCAGAAAACCATGCTGCAAGCAACAATTCTAGTGGTTCTGTGGCTTCTACACAGAAAAATGATGAATGCAGCGAGAAAACTAGTGAGGCTCAAAGCACATGTACATCGCCAATTTTGGAAGCTGAGAGTGCATGCCTGGAAAATATGCAGGATATGTCCCAGCTAAAGAGTTCTTCAAATTTGAGCAATATTGACATAGTGAACCACCAAAACTCTGCCAAATGTGAAAGGGAATCAGCTAAGCATAACGATGAAGCTGGGGAGAAATCAATAGTTCTATCCGAAACTGCAAGGAGCAACAAAACTTTTAAACCAACAGGTTTAAGGCTAGGTCAAGGCCATGAGGATAGTGAAACAAAGAATGAAGATGAAGTTGTAAGAACAACGTTTAGCAAAGCCAATCCTTTGATTAATACAGAGATTCGTGGATGCAGTGATGAAGTGGTAAAACCTTCTACTGGGGCTATTGACTTGATGGCGACATTTAAGGATATTCCAAAGAGCAATGATGAAAATTGTAGTTTCAATGGTGGTAATATAGCCAAGTTTGATTTTGATACACAACTGGAACTTTCTTTAAGAAGACATTTTCCTGGCAGCTCGTGTAAAACTGCATCTGAGGAAAGGAAAATATTGAACCATTCAAATGCTTCTGCCTTTTCTTGGTATAGCAGTAGTAAGTTGTTGCAGCCTCTTTTTTCAACACCATCAACTTCTGATAAATTAACAAATGCTGGTCAGAACTCTCACGAGTCTCATCAGTTATCTGAAAATACAAATATCTCTCATCAATTTTGGGGAAAAAATCAAAATCAGGAGAAAATCACCGGTCTGATCATTGGTCAGTCTGGACAAGTTGATCCAAAATTACCAAACAGTCAACCTAGATTCTTTCCTGCTACTGGGGTTAATTCTGATCATAAGTTCTCGGGACAAGGTAATGTTTTCCCTTCTATGATCCTCGCACAATCAGGTGTCCATCCCATATGGACTCCAAAGCCAGTATGCCAGAAAGAGAGTTCTCCATTTCCCACAAGTACTTCCTCCCAGTCCAATCCTGAAAGTCACAACTCAGAACGTCGTCACTGGTCAGATGATGCAACTTATACTACTGATCAAAATGCAAATGATCAAAGCAATTTGGATTGTGGGACACATGAATCTCCTGCCGCTGGTCAGAGTTCTAGCACTAGTTTTTACCATGATGCAGCAAATCATAACAGTAGTGGTACATACGGAAGCTTAGGCTGCAGAAGTGATGGAAATGCTACTTCAGCTCTGGTAGCCAAGGACAACCCTGAAAGTTTTATTGATAGTGGTCAACGTAGCTACGATGGATTCAGAGGGACAGATTCTCATATCAACCAACGGGAAGCAGCTCTAACAAAATTCCGACTGAAGCGGAAAGACAGATGCTATGAAAAGAAGGTTCGATACCAAAGCCGGAAGAGACTGGCGGAGCAGCGCCCTCGGGTGAAAGGGCAATTTGTTCGCCAAATACAACACAATGACCATCCAGTAGTAGATGCCAGTGGTGGTTCCTGA 2073 0.4226 MGEVAAHKGLIPTQEDQTNSASAVRWERFLPRMVLRVLLVEADDSTRQIIAALLRKCSYRVAAVRDGLKAWETLKNKADDIDLILTEVDLPSISGFSLLTLIMEHDTCKNIPVIMMSSHDSVSMVFKCMLKGAADFLIKPVRRNELRNLWQHVWRRHAISKPPENLTLPQIKLDVAAENHAASNNSSGSVASTQKNDECSEKTSEAQSTCTSPILEAESACLENMQDMSQLKSSSNLSNIDIVNHQNSAKCERESAKHNDEAGEKSIVLSETARSNKTFKPTGLRLGQGHEDSETKNEDEVVRTTFSKANPLINTEIRGCSDEVVKPSTGAIDLMATFKDIPKSNDENCSFNGGNIAKFDFDTQLELSLRRHFPGSSCKTASEERKILNHSNASAFSWYSSSKLLQPLFSTPSTSDKLTNAGQNSHESHQLSENTNISHQFWGKNQNQEKITGLIIGQSGQVDPKLPNSQPRFFPATGVNSDHKFSGQGNVFPSMILAQSGVHPIWTPKPVCQKESSPFPTSTSSQSNPESHNSERRHWSDDATYTTDQNANDQSNLDCGTHESPAAGQSSSTSFYHDAANHNSSGTYGSLGCRSDGNATSALVAKDNPESFIDSGQRSYDGFRGTDSHINQREAALTKFRLKRKDRCYEKKVRYQSRKRLAEQRPRVKGQFVRQIQHNDHPVVDASGGS* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0967 690 PANTHER TWO-COMPONENT RESPONSE REGULATOR 236 679 IPR045279 GO:0009736
Apr4g0967 690 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 232 IPR045279 GO:0009736
Apr4g0967 690 MobiDBLite consensus disorder prediction 514 530 - -
Apr4g0967 690 ProSiteProfiles CCT domain profile. 633 675 IPR010402 GO:0005515
Apr4g0967 690 CDD psREC_PRR 37 140 - -
Apr4g0967 690 SUPERFAMILY CheY-like 35 163 IPR011006 -
Apr4g0967 690 SMART REC_2 35 150 IPR001789 GO:0000160
Apr4g0967 690 MobiDBLite consensus disorder prediction 182 210 - -
Apr4g0967 690 Pfam Response regulator receiver domain 37 148 IPR001789 GO:0000160
Apr4g0967 690 ProSiteProfiles Response regulatory domain profile. 36 154 IPR001789 GO:0000160
Apr4g0967 690 PANTHER PRR RESPONSE REGULATOR 24 232 - -
Apr4g0967 690 PANTHER PRR RESPONSE REGULATOR 236 679 - -
Apr4g0967 690 Pfam CCT motif 633 675 IPR010402 GO:0005515
Apr4g0967 690 MobiDBLite consensus disorder prediction 508 578 - -
Apr4g0967 690 Gene3D - 33 282 - -
Apr4g0967 690 MobiDBLite consensus disorder prediction 544 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0967 Apr-Chr4 7891425 7896788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0967 316 682 Response Regulator Gene Family AT5G24470 30.504 1.69e-26 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Apr4g0967 Response_reg 5.2e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0967 K12130 - gmx:100779346 1052.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0967 4 7891425 7896788 Apr4g0967 4 7891425 7896788 ECH
Apr10g1166 10 23891258 23896318 Apr4g0967 4 7891425 7896788 ECH