Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0954 ATGGGCCAGTGCTACGGCAAAACCAATCCCACTGCGGGGAACGAACATGACCCCAACACCACCACCATAATTGCCGCCTCCGGTGACGGTTCTCGCTCCCCGATGCCCTCCTCCGATGGCGTCGCCAACGGCTTTCCGTCGGTGAAGAACACGCCGGCTCGGTCCTCCTCGCATGCCAGCCCCTGGCCGAGCCCCTACCCTCATGGAGTGAACCCGAGTCCGTCACCGGCGAGGGCCTCGACGCCGAGGAGGTTCTTTCGGCGACCTTTTCCACCGCCTTCGCCGGCAAAGCATATAAGAGCGTCTCTGGCGAAGAGGCTTGGGCAGGCGAAGCCCAAAGAGGGCCCAATTCCGGAGGAGCGTGGGGCGGAGGCGGAACAGTCGCTGGATAAGAGCTTTGGATATAGCAAGAACTTTGGAGCTAAGTATGAGCTTGGGAAGGAAGTGGGGCGAGGGCATTTTGGTCATACTTGCTCCGCCAGGGGCAAGAAGGGTGAGCTCAAAGACCACCCTGTAGCTGTTAAAATCATTTCCAAGGCCAAGATGACCACAGCAATAGCAATTGAAGATGTTCGTAGAGAGGTGAAGCTGTTAAAGGCTCTGTCTGGCCATAAGCATCTGGTCAAATTTCATGATGCTTGCGAGGATGCCAACAATGTGTACATAGTTATGGAATTGTGTGAAGGTGGGGAGCTTCTTGACCGAATTTTGTCAAGGGGAGGGAAGTATACAGAGGAGGATGCAAAAGTTATAGTTTTGCAGATTCTAAGTGTAGTTGCCTTTTGTCATCTTCAAGGTGTTGTGCACCGTGACCTGAAGCCCGAGAATTTTCTTTTTACTTCAAGAAGTGAAGATGCTGATATGAAGCTTATTGATTTTGGTCTGTCTGACTTCATCAGGCCAGAAGCCAAGGACTTTGTTAAAAGGCTCCTAAATAAGGACTACAGGAAAAGAATGACTGCTGCCCAAGCTCTAACTCACCCCTGGTTGAGGGATGACAATCGTCCTATCCCTTTAGATATATTAATTTATAAATTGGTGAAGTCTTATCTTCATGCAACACCATTCAAACGTGCAGCAGTAAAGGCACTTTCAAAAGCCTTGACAGAGGATCAGTTGGTGTATCTTCGAGCCCAGTTCAGATTGTTGGAACCAAATAGAGATGGGCATGTCTCCCTTGATAATTTCAAAATGGCTCTTGTACGTCATGCAACTGATGCCATGAGGGAGTCAAAGGTTCTTGAGATCATCCACGTGATGGAACCACTTGCGTATAGAAAGATGGATTTTGAAGAATTTTGTGCTGCTGCAACTAGTACATATCAATTGGAGGCACTTGATAGGTGGGAAGATATTGCCAACACTGCTTTTGAGCATTTTGAGAGAGAAGGCAACCGTGTGATATCAATTGAAGAGTTAGCAAGGGAGTTGAATCTTGGTCCTTCAGCTTATTCACATCTCAAAGATTGGATACGAAATACTGACGGAAAGCTTAGTTTACTTGGATATACAAAATTTTTGCATGGCGTGACTATCAGGACTTCAATCCCAAGACCCCGTTAG 1563 0.4811 MGQCYGKTNPTAGNEHDPNTTTIIAASGDGSRSPMPSSDGVANGFPSVKNTPARSSSHASPWPSPYPHGVNPSPSPARASTPRRFFRRPFPPPSPAKHIRASLAKRLGQAKPKEGPIPEERGAEAEQSLDKSFGYSKNFGAKYELGKEVGRGHFGHTCSARGKKGELKDHPVAVKIISKAKMTTAIAIEDVRREVKLLKALSGHKHLVKFHDACEDANNVYIVMELCEGGELLDRILSRGGKYTEEDAKVIVLQILSVVAFCHLQGVVHRDLKPENFLFTSRSEDADMKLIDFGLSDFIRPEAKDFVKRLLNKDYRKRMTAAQALTHPWLRDDNRPIPLDILIYKLVKSYLHATPFKRAAVKALSKALTEDQLVYLRAQFRLLEPNRDGHVSLDNFKMALVRHATDAMRESKVLEIIHVMEPLAYRKMDFEEFCAAATSTYQLEALDRWEDIANTAFEHFEREGNRVISIEELARELNLGPSAYSHLKDWIRNTDGKLSLLGYTKFLHGVTIRTSIPRPR* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0954 520 MobiDBLite consensus disorder prediction 1 62 - -
Apr4g0954 520 PANTHER CDPK-RELATED KINASE 3 49 302 - -
Apr4g0954 520 PANTHER CDPK-RELATED KINASE 3 301 513 - -
Apr4g0954 520 Gene3D Transferase(Phosphotransferase) domain 1 135 298 - -
Apr4g0954 520 PANTHER SERINE/THREONINE-PROTEIN KINASE 301 513 - -
Apr4g0954 520 PANTHER SERINE/THREONINE-PROTEIN KINASE 49 302 - -
Apr4g0954 520 Gene3D Transferase(Phosphotransferase) domain 1 299 336 - -
Apr4g0954 520 SUPERFAMILY EF-hand 356 509 IPR011992 -
Apr4g0954 520 ProSiteProfiles Protein kinase domain profile. 143 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0954 520 MobiDBLite consensus disorder prediction 112 127 - -
Apr4g0954 520 MobiDBLite consensus disorder prediction 1 128 - -
Apr4g0954 520 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Apr4g0954 520 ProSiteProfiles EF-hand calcium-binding domain profile. 371 406 IPR002048 GO:0005509
Apr4g0954 520 SMART serkin_6 143 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0954 520 Gene3D - 337 510 - -
Apr4g0954 520 ProSitePatterns Protein kinases ATP-binding region signature. 149 175 IPR017441 GO:0005524
Apr4g0954 520 SUPERFAMILY Protein kinase-like (PK-like) 138 346 IPR011009 -
Apr4g0954 520 Pfam Protein kinase domain 143 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0954 Apr-Chr4 7733141 7741095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0954 298 514 EF-hand Containing Proteins AT3G50530 59.091 5.09e-84 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Apr4g0954 Pkinase 2.8e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0954 - - cpap:110808395 761.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0954 4 7733141 7741095 Apr4g0954 4 7733141 7741095 ECH