Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0953 ATGGGTAGTGGAGAGAAGAGTGTGAAGGGGTTTCATTTGCACCGCACACACCACCATCACCATGGGAAGAAGCAAGAGTTCAGAGGAGTGCCCAAAGGGTGTCTTGCAATCAAGGTTGGTCAAGGAGAAGAGCAACAAAGGTTCGTGGTGCCTGTCATATACTTCAACCACCCTCTCTTCATGCAGCTCCTCAAGGAAGCAGAAGAAGAATACGGTTTCGATCAAAAGGGAACCATAACCATCCCTTGTCATGTTGAGGAGTTCAGGAACGTTCGAGGCATGATCGATAGGGAAAAGCATCACCAACATCAAACTGGCTGCTTTGGCTTCTGA 333 0.4835 MGSGEKSVKGFHLHRTHHHHHGKKQEFRGVPKGCLAIKVGQGEEQQRFVVPVIYFNHPLFMQLLKEAEEEYGFDQKGTITIPCHVEEFRNVRGMIDREKHHQHQTGCFGF* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0953 110 MobiDBLite consensus disorder prediction 11 26 - -
Apr4g0953 110 MobiDBLite consensus disorder prediction 1 27 - -
Apr4g0953 110 PANTHER SMALL AUXIN-UP RNA-RELATED 19 104 - -
Apr4g0953 110 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 19 104 IPR003676 GO:0009733
Apr4g0953 110 Pfam Auxin responsive protein 24 92 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0953 Apr-Chr4 7726332 7726904 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0953 30 89 Calmodulin-binding Proteins AT5G20810 56.667 4.87e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0953 - K14488 pvy:116108881 186.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0953 4 7726332 7726904 Apr10g1184 10 24139545 24139925 PCT