Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0943 ATGGATTCTAGTGCTGCATTGCCATTGCCAACGAACAATGGATTCAAAGCAAAGGAACTTCCTGATTTTGAGGAAGTTGTAGAGAAAGATCCCACAAGCCGATATCTTCGATACAATGAAATCTTGGGCAAGGGTGCTTTCAAGACTGTGTATGATTCTGATACTTATTATAGAGGTTTTGATGAAGTTAATGGAATTGAAGTTGCTTGGAACCAAGTTCGAATTGATGAACTCCTACAGTCAACAGATGATCTTGCAAAATTATATTCTGAAGTGAATCTATTAAAATCTTTGAAACATGAAAATATCATAAAATTCTTTAATTCCTGGATTGATGATAAGAACAAAACTGTCAACATTATTACTGAACTATTCACATCGGGAAATTTAAGACAGTATCGTAAGAGGCATAGGTATGTTGACATGAAAGCCATAAAAGGTTGGGCTAGACAAATTCTTCAGGGCTTGATATATCTTCACAATCATAAACCACCTATTATTCATAGAGACTTGAAATGTGACAACATCTTTGTGAATGGAAATCATGGAGAGGTTAAGATAGGAGATCTTGGTTTAGCAATTGTCATGCAACAACCAACTGCTCGAAGTGTTATTGGAACTCCTGAGTTTATGGCTCCAGAACTATATGAAGAGGAATACAATGAACTTGTTGATGTCTATTCTTTTGGGATGTGCATATTAGAGATGGTTACTTTTGAGTACCCGTATAGTGAATGCAAAAATCCAGCTCAAATCTATAAAAAAGTGACCTCTGGAATTGAACCTACATCCCTTAAAAGGATTAGTGATCCCCAAATTAAGGAGTTTATTAAGAAATGCCTTGTTCCAGCATCTAAGAGATTGTCTGCAGAGGATCTTCTTAAAGACCCATTTCTACAAATTGAGAGTCCAAAGGATCCAATTCTTGATCTCTCACAATTACCTAATAAATCTCCAAATGTTGTAGATTCGTCCAAGTCTCGTCACCCATCAATGGACCTAGATGCTGATTCCAAACACATCTCTTTAGGTACCTGTACTAATGAAAGTAGCCAAGGAAGTCCACATTGTTTAGTTCTAGAAATTCAGAAGACGCATAAGAACAATGAGTTTAAGTTGAAAGGGACCAAAAATGATGACAACTCAATATCATTGATCTTGCGCATTGCTGATTTAGGTGGTCAAGTAAGGAATATACATTTTCTCTTTTACCTTGAGACAGATACTGCTGTTTCTGTTGCCTCAGAGATGGTTGAAAACTTGGAGTTGGCAGATCATGATGTAGCTTTCATAGCCGAGCTTATCGATTACTTGATAAAAAAATTTGTACCAAGGTGGAAGCTCCCATCTGATTATTCCTTGAGTGGAGATAGTCAAACCTTAATACCATGCCCATGGGGTTCTGCCCTAACTAGTATTCCCTCTGAATTGGTTTTGGATCTAGATACTACTACTCAAAGAGGTGGTTTTGCATTAGTTAGGGAAAGTTGCATGTTTAATGATGCCAATAAGGCTACTTTTAAGGGTGAGTATAGTTCTTTTCCTAGTTTGGCTAGCTTGGAAGATCAATATTCAGAAGAATCTATAGCATCTGAGATAGTTATTGAAGATGCTTGCATGAAAAGCAACAACTATCTTGATTCAGATGTTGATGGGAGCTTTGAACGATTAAGTTGGTCTACCTCTGTACAAGAGTTTGGAGATACATATTTTGAAGCTTGTAAATTGCAGACTACAAATAATAATGATGGAGAAGGCATTGAGATAAATGAATCATCACAGAATCCACATTTTATATCGACAACTTTTTGTGAAACATCTAATCTTACGAGCTTGACAAGCAATTTTTCTTCTCTATCTTTAGCTAACAAAGACATTGATGTTGAACTAAAGTTCGAACTTGAAGCAATAGAGTCACAATATCAACATTGGTTTCAAGAACTTTCTAGAATGAAGTTAGATGCATTGGAAGCAACTAGAAGGAGGTGGATAGCCAAAAAAAAGCTTATTGTTCATTAA 2019 0.3616 MDSSAALPLPTNNGFKAKELPDFEEVVEKDPTSRYLRYNEILGKGAFKTVYDSDTYYRGFDEVNGIEVAWNQVRIDELLQSTDDLAKLYSEVNLLKSLKHENIIKFFNSWIDDKNKTVNIITELFTSGNLRQYRKRHRYVDMKAIKGWARQILQGLIYLHNHKPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDVYSFGMCILEMVTFEYPYSECKNPAQIYKKVTSGIEPTSLKRISDPQIKEFIKKCLVPASKRLSAEDLLKDPFLQIESPKDPILDLSQLPNKSPNVVDSSKSRHPSMDLDADSKHISLGTCTNESSQGSPHCLVLEIQKTHKNNEFKLKGTKNDDNSISLILRIADLGGQVRNIHFLFYLETDTAVSVASEMVENLELADHDVAFIAELIDYLIKKFVPRWKLPSDYSLSGDSQTLIPCPWGSALTSIPSELVLDLDTTTQRGGFALVRESCMFNDANKATFKGEYSSFPSLASLEDQYSEESIASEIVIEDACMKSNNYLDSDVDGSFERLSWSTSVQEFGDTYFEACKLQTTNNNDGEGIEINESSQNPHFISTTFCETSNLTSLTSNFSSLSLANKDIDVELKFELEAIESQYQHWFQELSRMKLDALEATRRRWIAKKKLIVH* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0943 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Apr4g0943 672 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 383 439 IPR024678 GO:0004674|GO:0005524
Apr4g0943 672 SUPERFAMILY Protein kinase-like (PK-like) 33 300 IPR011009 -
Apr4g0943 672 MobiDBLite consensus disorder prediction 309 332 - -
Apr4g0943 672 Gene3D Phosphorylase Kinase; domain 1 22 123 - -
Apr4g0943 672 CDD STKc_WNK 34 299 - -
Apr4g0943 672 Pfam Protein kinase domain 39 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0943 672 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 672 - -
Apr4g0943 672 SMART serkin_6 36 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0943 672 PANTHER KINASE DOMAIN PROTEIN 4 672 - -
Apr4g0943 672 Gene3D - 381 453 - -
Apr4g0943 672 MobiDBLite consensus disorder prediction 313 327 - -
Apr4g0943 672 ProSiteProfiles Protein kinase domain profile. 36 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0943 672 Gene3D Transferase(Phosphotransferase) domain 1 125 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0943 Apr-Chr4 7669164 7672320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0943 27 454 MAP Kinase Kinase Kinase AT1G64630 58.933 1.35e-167 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Apr4g0943 Pkinase 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0943 K08867 - gmx:100272197 838.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0943 4 7669164 7672320 Apr4g0943 4 7669164 7672320 ECH