Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0912 ATGGAAGAGAGAACCAAGAGGAAACATTTCAGTCTGATCAATGAACTAATCCAAGGAAAGGAGCTAGCAAAGCAGCTCAGTAACCATCTGGTCTCTTCTTCTCCATCATCCCATGAAACCAATGAATTCTTGATTGAGAAGATACTTTCTTCCTATGAGAAAGCACTCACAGTGCTTAACACGGGGACTGTTGTGGGAGAGACTATGACCACAAGTGGCAACATGATGGATTCCCATTGTTCTACCAATGGGAGCCCCAGAAGTGAGGTCGTGGACCGTGAACTTGAGCACAAATCTGTCTTCAAGAAAAGAAAGACCATGCCCAGATGGACTGAGCAAGTGAAGATTTGCTCAAGAACAGGACTTGAGGGGTCTTTGGATGATGGATATAGCTGGAGAAAATATGGGCAAAAGGATATTCTTGGATCCAAGTTTCCAAGAGGATATTACAGATGCACACATAGAAATGTACAAGGGTGCCTGGCAACAAAGCAAGTTCAAAGGTCAGATGAAGACCCAACCGTAATTGAGGTAACCTACAGAGGAAGACACACGTGCATGCAAGCTAAGCATTTAAACAAAGCATTCCCATCAAACATAAAGATGAATTTGGGGGGAAATCAATTCCACTATGATCAACAACTACAAGAGAAAATACAACAAACCCCAAATGGAATTTTCACGTTTGAAACAGATTTTAAAGTCAAAACAGAGGAACTGGAAATGGAAACCAAGGAGGATATCTTCCCATGGTTTTGCTTTTCTTCTCCATCAATTGGATCAGAAAATGAAGACAACAACATGTTACTCGAAACCATGATTGAAAATCATTTCATGGAAAGCTTTTCTCCTGCATTCATATCACCAGTGACTTCAGAATCAAACCTTTTCTGTGTGTCAGCATGCCACTTGGGTAGCACTGGACTATGCCAAAACATACAAACCTCAGAATCTGATATCACTGAGATAATTTCAGCCCCAACTTCAGTCACCAACTCCCCAATCCTGGATTTGGATACCTTGCTTCATAAAGGTGATTTTGACACGGATTTTCCTTTCAACACCGCTGAATATTTCTCTTCACAAGACTTTGCATGCACTTCCACGTAG 1110 0.4144 MEERTKRKHFSLINELIQGKELAKQLSNHLVSSSPSSHETNEFLIEKILSSYEKALTVLNTGTVVGETMTTSGNMMDSHCSTNGSPRSEVVDRELEHKSVFKKRKTMPRWTEQVKICSRTGLEGSLDDGYSWRKYGQKDILGSKFPRGYYRCTHRNVQGCLATKQVQRSDEDPTVIEVTYRGRHTCMQAKHLNKAFPSNIKMNLGGNQFHYDQQLQEKIQQTPNGIFTFETDFKVKTEELEMETKEDIFPWFCFSSPSIGSENEDNNMLLETMIENHFMESFSPAFISPVTSESNLFCVSACHLGSTGLCQNIQTSESDITEIISAPTSVTNSPILDLDTLLHKGDFDTDFPFNTAEYFSSQDFACTST* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0912 369 ProSiteProfiles WRKY domain profile. 121 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g0912 369 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 354 IPR044810 GO:0003700
Apr4g0912 369 SUPERFAMILY WRKY DNA-binding domain 125 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr4g0912 369 Pfam WRKY DNA -binding domain 127 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g0912 369 MobiDBLite consensus disorder prediction 70 88 - -
Apr4g0912 369 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 354 - -
Apr4g0912 369 SMART WRKY_cls 126 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr4g0912 369 MobiDBLite consensus disorder prediction 70 89 - -
Apr4g0912 369 Gene3D WRKY domain 113 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0912 Apr-Chr4 7362135 7364807 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0912 11 249 WRKY Transcription Factor Family AT4G23810 40.520 1.36e-53 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr4g0912 WRKY 2.3e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0912 - - gmx:100790050 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0912 4 7362135 7364807 Apr1g0705 1 8417409 8419187 ECH
Apr4g0912 4 7362135 7364807 Apr4g0912 4 7362135 7364807 ECH
Apr10g1234 10 24728958 24731797 Apr4g0912 4 7362135 7364807 ECH
Apr7g0532 7 11786912 11788258 Apr4g0912 4 7362135 7364807 ECH
Apr2g1266 2 18886565 18888431 Apr4g0912 4 7362135 7364807 ECH
Apr4g0912 4 7362135 7364807 Apr10g1234 10 24728958 24731797 PCT