Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0895 ATGGGAAACAATGAAGAAGAGAAATCTACTAAGACTGAAAAGCCTTCTTCACCTGTAGCAATGGATCAAACCAATCATACCAACCAGACCAATATTCATGTCTATCCTGATTGGGCAGCCATGCAGGCATATTATGGGCCAAGAGTCCCCATCCCGCCATACTACAACTCAGCTGTGGCTTCTGGTCACACTCCTCACCCGTACATGTGGCCACCGCAGGTACCTATGATGCCACCTTATGGGCCCCCTTATGCAGCCATTTATTCACATGGAGGAGTTTATACTCACCCTGCAGTTCCTATGGGGCCACATCCACATGGTCAAGCAGTTCCATCTTCACCTGCTGCTGGAACTCCTTTAAGCATAGAGACACCCCCCAAATCATCTGGAAATACTGATCAGGGTTTAATGAAGAAATTGAAGGGGTTTGATGGACTTGCAATGTCAATAGGCAATGGCCATACTGAAAGTGCTGAGCGTGGAGGTGAAACCAGGCTATCCCAAAGTGTGGAAACTGAGGGTTCCAGTGATGGAAGCGATGGCAGCACTGCAGGGGCTAATCAAACAAGAAGGAAAAGAAGCCGTGAGGGAACACCAACCACTGCAGATGATGGAGAAGGGAAAACTGAGATACAAGGCAGTCCCATTTCCAAAGAAACTGCAGCTTCTAATAAGATGATGTCAGTTACCCCTGCCAGTGTTGCTGGAAAAGTAGTTGGACCTGTAGTGTCTTCAGGTATGATCACCACGCTGGAGCTGAGAAATCCTTCCAGTGTTCATTCTAAAACAAATACCACGAGTGCCCCACAACCTTGTGCAGTATTGCCTGCAGAAGCTTGGTTACAGAATGAGCGGGAGCTGAAGCGTGAGAGGCGGAAACAATCTAATCGAGAATCTGCCAGAAGATCCAGACTAAGGAAGCAGGCTGAAACTGAAGAACTGGCACGAAAAGTTGAATCCTTGAATGCTGAGAACGTGTCACTGAAATCAGAAATAAATCGACTGACTGAAAGTTCTGAAAAACTGAGGGTTGAAAATGCTACATTAAGGGAAAAACTTAAAAACGCTCAATTGGGACAAACACAAGAGATAACTCTGAACTGCATTGACAGCCAGAGGGCTACACCTGTAAGTACAGAAAACTTACTATCAAGAGTTAATAACTCCGGTTCTAATGATAGAACTGAGGAAGATGAGAATGGTTTTTGTGACAAGAAACCAAATTCTGGTGCAAAGCTGCATCAACTACTGGACACAAGTCCTAGAGCTGATGCTGTGGCAGCTGGTTGA 1290 0.4574 MGNNEEEKSTKTEKPSSPVAMDQTNHTNQTNIHVYPDWAAMQAYYGPRVPIPPYYNSAVASGHTPHPYMWPPQVPMMPPYGPPYAAIYSHGGVYTHPAVPMGPHPHGQAVPSSPAAGTPLSIETPPKSSGNTDQGLMKKLKGFDGLAMSIGNGHTESAERGGETRLSQSVETEGSSDGSDGSTAGANQTRRKRSREGTPTTADDGEGKTEIQGSPISKETAASNKMMSVTPASVAGKVVGPVVSSGMITTLELRNPSSVHSKTNTTSAPQPCAVLPAEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLNAENVSLKSEINRLTESSEKLRVENATLREKLKNAQLGQTQEITLNCIDSQRATPVSTENLLSRVNNSGSNDRTEEDENGFCDKKPNSGAKLHQLLDTSPRADAVAAG* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0895 429 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 291 306 IPR004827 GO:0003700|GO:0006355
Apr4g0895 429 PANTHER G-BOX-BINDING FACTOR 3 1 429 - -
Apr4g0895 429 MobiDBLite consensus disorder prediction 391 405 - -
Apr4g0895 429 CDD bZIP_plant_GBF1 289 337 IPR045314 GO:0003700|GO:0006355
Apr4g0895 429 Pfam bZIP transcription factor 284 346 IPR004827 GO:0003700|GO:0006355
Apr4g0895 429 Coils Coil 304 359 - -
Apr4g0895 429 MobiDBLite consensus disorder prediction 282 311 - -
Apr4g0895 429 MobiDBLite consensus disorder prediction 384 429 - -
Apr4g0895 429 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 429 IPR044827 GO:0003700|GO:0006355|GO:0043565
Apr4g0895 429 MobiDBLite consensus disorder prediction 1 28 - -
Apr4g0895 429 Pfam G-box binding protein MFMR 1 100 IPR012900 -
Apr4g0895 429 SUPERFAMILY Leucine zipper domain 287 343 IPR046347 GO:0003700|GO:0006355
Apr4g0895 429 SMART brlzneu 284 348 IPR004827 GO:0003700|GO:0006355
Apr4g0895 429 MobiDBLite consensus disorder prediction 254 311 - -
Apr4g0895 429 MobiDBLite consensus disorder prediction 99 224 - -
Apr4g0895 429 MobiDBLite consensus disorder prediction 162 188 - -
Apr4g0895 429 MobiDBLite consensus disorder prediction 114 135 - -
Apr4g0895 429 Coils Coil 277 297 - -
Apr4g0895 429 Pfam Disordered region downstream of MFMR 133 263 - -
Apr4g0895 429 Gene3D - 287 340 - -
Apr4g0895 429 MobiDBLite consensus disorder prediction 189 203 - -
Apr4g0895 429 MobiDBLite consensus disorder prediction 254 271 - -
Apr4g0895 429 MobiDBLite consensus disorder prediction 14 28 - -
Apr4g0895 429 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 286 349 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0895 Apr-Chr4 7205824 7212114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0895 1 429 bZIP Transcription Factor Family AT2G46270 51.835 5.09e-126 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr4g0895 MFMR_assoc 3.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0895 K09060 - gmx:778133 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0895 4 7205824 7212114 Apr4g0895 4 7205824 7212114 ECH