Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0891 ATGCCGAAGAATAAGGGAAAGGGAGGGAAGAACAGGAAGAGGGGAAAGAACGAAGCAGACGACGAGAAGAGAGAGCTGGTGTTCAAGGAGGACGGTCAGGAATACGCACAGGTCCTTCGCATGCTCGGTAATGGCCGATGCGAAGCCATGTGCATCGACGGCACAAAGAGGCTCTGTCACATCCGCGGCAAGATGCACAAGAAGGTCTGGATCGCCGCCGGCGACATCATCCTCGTCGGACTCCGGGACTACCAGGACGACAAAGCTGATGTCATCCTCAAGTACATGCCCGACGAGGCTCGCCTCTTGAAGGCCTACGGCGAGTTGCCTGACACCACGCGCCTCAACGAGGGTATCGGCGCCGGCATCGATGAGGAGGACGATATTATCTTTTAG 396 0.5682 MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDTTRLNEGIGAGIDEEDDIIF* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0891 131 Gene3D - 2 131 IPR012340 -
Apr4g0891 131 ProSiteProfiles S1 domain IF1 type profile. 22 96 IPR006196 GO:0003723|GO:0003743|GO:0006413
Apr4g0891 131 PANTHER EIF-1A 1 128 IPR001253 GO:0003743|GO:0006413
Apr4g0891 131 MobiDBLite consensus disorder prediction 1 25 - -
Apr4g0891 131 CDD S1_IF1A 33 109 IPR001253 GO:0003743|GO:0006413
Apr4g0891 131 Pfam Translation initiation factor 1A / IF-1 32 93 IPR006196 GO:0003723|GO:0003743|GO:0006413
Apr4g0891 131 SMART eIF1neu4 28 110 IPR001253 GO:0003743|GO:0006413
Apr4g0891 131 TIGRFAM eIF-1A: translation initiation factor eIF-1A 14 110 IPR001253 GO:0003743|GO:0006413
Apr4g0891 131 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1A 1 128 - -
Apr4g0891 131 ProSitePatterns Eukaryotic initiation factor 1A signature. 41 63 IPR018104 GO:0003743|GO:0006413
Apr4g0891 131 Hamap Translation initiation factor 1A [eif1a]. 16 110 IPR001253 GO:0003743|GO:0006413
Apr4g0891 131 SUPERFAMILY Nucleic acid-binding proteins 2 128 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0891 Apr-Chr4 7178991 7181152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0891 1 119 Eukaryotic Initiation Factors Gene Family AT2G04520 95.798 9.56e-82 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0891 K03236 - gmx:100780794 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0891 4 7178991 7181152 Apr10g1268 10 25014551 25015836 PCT