Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0879 ATGAATATAAAAACCCATTTACCTCGGCACACTTTTTTTGCATTCTTCACTCTTGCAATATTCATAGAGTATTACCCACTCGTGTCGCCTGCATCCAATAACCCACAAGGTGAATGTGTGTTGAATTTCAACACATACCCATACGTGGCATTTGGTGAATGTGGCGATGTGAAAGAGGACATAAGCACTTGGGGTGGCGATGGATTCCCTACCACTCTATGCTGCCGTAACGCTCTCACGGTTCTGTCGGACGCGTTGGCCTCACAAGCACGCAACTCAACAGGACAACTCTTCCTTTCCCAAGACCAATGGCAGAACTGTAACCAATCATTTCAACCTCAACAAGGGATGTCACCTACTTCATGTGGCTTTGACAATTTGTACCAAGGCAACTTCAGGTGCTCCAGCTTCGTTTTGCAGAGTGTTCGAGTCATGCAACAGTACCAAGATGCATTGGACAAGTGCTCTCACTTCGACCTTCCATTTTACCAGTCTTGTGCTGATTGCACCACTGCAATATTGAACGTCAGAGATGGTTTATATTCCCAAGTAATGGGCAAAGACAACAACAACACCGAGAGAACCATATGCGGTGTAGCAGCTATTGTTGCTGTTGCAGCTGGCAAACCCGATGATCCTGCCCTCGTTGACAAATTCTTACGCTGCTTGCCAACTTCAGGAACAAACAAAAGATTTTCGGTGAAACTGCTGTTAAGCGTGCCAATTGTTGTGCTTGCAATATGTCTTATCATTATTATGGTAAAATGTATGTCGAAGAAGAAGCCTAGTAGGCCAGTGTACTTGAAAGAGATCACTGCGTGGTCTGGACTGTACTGGTTTTCCAAGGCTGAAATTGAGAATGCAATGAGTTTTGGCGGTGAAAAGATAAGTCTTGGTCGTGGGAGTGCGGGGCAGGTGTATAGAGGGGTTCTCCCCAGTGGTCAAGTTGTGGCCATCAAGCACTTGACAAAGAGTAACACTTCTGATTCTTTCACTCGAGAAGTTGAAGGGCTTTCTAGGCTTCGCCATCCAAACTTGGTTTGCTTGTTTGGGTGTTGCATTGAAGGTGATGAGAGATTTTTAGTCTATGAGTTTTGTGCAAACGGAAATCTTGCTCAACATCTCTTAAGAAGAGACAGCCACTTGACATGGGAAACAAGAGTCAGAATTTTGAGAGACTGTTCATTTGCACTCAAATACCTCCACCATCATATAGAGGGCTGTGTTGTCCATAGAGATATAAAGCTTACGAACATCCTTTTGAATGATAAATACCAAGCCAAACTGTCGGATTTTGGATTGGCAAGGATGATGGGAATGGAAGAGAGCAAGGTTTTTACTGATGTTAGAGGAACCATAGGATACATGGACCCAGAGTACATGAGTAATGCAAAGCTAACTTGCGCCAGTGATGTATACAGTTTTGGCATTGTTGCTTTACAAATTCTGTCAGGACAGAAAGTCATAGAATTGGATCTTGATGCCAGAGATCAACTCACTAGGAAGGCAAGAGATGTAAGCTTGGGAAAGCGTCCACTGTCGGATTTTGAAGACCCACGGCTAAATGGAAAAGTTGATAAGGCAGACTTTGAAGCCATTCTACAGATTGCAGTACTGTGTGTTGCCAAATCAAGCAAAGGTCGTCCAACCATTGAGGTTGTCTTTGAGGAATTGAATAAGGTCTGCAGAGAAACGGAAGCACGAATGAAGGCAAAGCATGATGAAAGCTCATCAACAACATCCACTCCCAGCTCTAAGTCCTCCAAATTGACTCCTATTTGA 1782 0.4394 MNIKTHLPRHTFFAFFTLAIFIEYYPLVSPASNNPQGECVLNFNTYPYVAFGECGDVKEDISTWGGDGFPTTLCCRNALTVLSDALASQARNSTGQLFLSQDQWQNCNQSFQPQQGMSPTSCGFDNLYQGNFRCSSFVLQSVRVMQQYQDALDKCSHFDLPFYQSCADCTTAILNVRDGLYSQVMGKDNNNTERTICGVAAIVAVAAGKPDDPALVDKFLRCLPTSGTNKRFSVKLLLSVPIVVLAICLIIIMVKCMSKKKPSRPVYLKEITAWSGLYWFSKAEIENAMSFGGEKISLGRGSAGQVYRGVLPSGQVVAIKHLTKSNTSDSFTREVEGLSRLRHPNLVCLFGCCIEGDERFLVYEFCANGNLAQHLLRRDSHLTWETRVRILRDCSFALKYLHHHIEGCVVHRDIKLTNILLNDKYQAKLSDFGLARMMGMEESKVFTDVRGTIGYMDPEYMSNAKLTCASDVYSFGIVALQILSGQKVIELDLDARDQLTRKARDVSLGKRPLSDFEDPRLNGKVDKADFEAILQIAVLCVAKSSKGRPTIEVVFEELNKVCRETEARMKAKHDESSSTTSTPSSKSSKLTPI* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0879 593 ProSiteProfiles Protein kinase domain profile. 292 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0879 593 PANTHER OS01G0253100 PROTEIN 49 572 IPR045271 GO:0004714|GO:0006468
Apr4g0879 593 Pfam Protein kinase domain 297 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0879 593 Gene3D Phosphorylase Kinase; domain 1 254 365 - -
Apr4g0879 593 MobiDBLite consensus disorder prediction 576 593 - -
Apr4g0879 593 SMART serkin_6 292 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr4g0879 593 MobiDBLite consensus disorder prediction 568 593 - -
Apr4g0879 593 Pfam SPARK 34 193 IPR043891 -
Apr4g0879 593 SUPERFAMILY Protein kinase-like (PK-like) 296 558 IPR011009 -
Apr4g0879 593 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 40 49 572 - -
Apr4g0879 593 ProSitePatterns Serine/Threonine protein kinases active-site signature. 409 421 IPR008271 GO:0004672|GO:0006468
Apr4g0879 593 Gene3D Transferase(Phosphotransferase) domain 1 366 587 - -
Apr4g0879 593 Coils Coil 555 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0879 Apr-Chr4 7119696 7124000 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0879 298 591 Receptor kinase-like Gene Family AT2G19230 39.262 4.39e-57 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Apr4g0879 Pkinase 5.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0879 - - gmx:100790391 876.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0879 4 7119696 7124000 Apr10g1300 10 25330648 25334516 PCT