Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0874 ATGGAATCCATGAACCAATTGAACACAGGAGCTGGTTCATCCAACTCATCGAGCTCAAAAATTTCAGCACTGATTGTGGATGATGATGCTGTCACTGGTAAAATCCACAAGACCTTGCTCGAGAGCTTGTTTAAAATTGAGACAAAAACAGTTAAGGATGGAAAGGAAGCAGTGAATTTGTGTCGTTCTGGGGCTAAGTTTGACATAATATTCATGGACAAAGAAATGCCAATCATGGATGGTGTTGAGGCAACAAAACAGCTACGTGCTATGGGTGTGAAGAGCATGATTGTGGGAATCACTAGCAGGGCTGATGGCAAAGAAACACAGGAATTTCTAGCTGCTGGATTGAACCACTGTCTTGAGAAGCCTCTAAAGCGTGCAATGGTTGAAGTTGTGTTGCGAGAGCTTAAAAATTTAAGCATTTGA 429 0.4196 MESMNQLNTGAGSSNSSSSKISALIVDDDAVTGKIHKTLLESLFKIETKTVKDGKEAVNLCRSGAKFDIIFMDKEMPIMDGVEATKQLRAMGVKSMIVGITSRADGKETQEFLAAGLNHCLEKPLKRAMVEVVLRELKNLSI* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0874 142 Pfam Response regulator receiver domain 24 128 IPR001789 GO:0000160
Apr4g0874 142 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 6 139 - -
Apr4g0874 142 SUPERFAMILY CheY-like 19 138 IPR011006 -
Apr4g0874 142 ProSiteProfiles Response regulatory domain profile. 22 138 IPR001789 GO:0000160
Apr4g0874 142 SMART REC_2 21 133 IPR001789 GO:0000160
Apr4g0874 142 PANTHER TWO-COMPONENT RESPONSE REGULATOR 6 139 - -
Apr4g0874 142 Coils Coil 139 142 - -
Apr4g0874 142 Gene3D - 3 140 - -
Apr4g0874 142 CDD REC_hyHK_CKI1_RcsC-like 24 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0874 Apr-Chr4 7074654 7075218 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0874 21 137 Response Regulator Gene Family AT3G04280 51.261 1.83e-33 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Apr4g0874 Response_reg 4.5e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0874 - - gmx:102665311 189.889