Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0863 ATGGAACCTAATGACAACCAACTCAGCTCCTTCTTCCATCACCACCACCATCACCACCACCACCAGCAACCCTCCACCGCCGCTACCACTACCGCTTCCCCCACCAACGGCCTCTTGCCCAACGCCGATGGGTCCCACATGCTCTACCCTCACTCCGTTGCTTCCGCGGTTTCTTCTCAGCTTGAACCTGCCAAACGGAAGCGTGGAAGGCCCAGAAAGTATGGAACCCCCGAACAAGCTCTTGCTGCGAAGAAAGCCGCAACCACGTCGTCTCAGTCTTTCTCTTCCGAGAAGAAGACCCACTCTTCACCTTTCCCTTACTCTTCCAAGAAATCCCATTCCTTCGCTTTAGGTAATGCAGGACAAGGCTTCACTCCACATGTCATTTCTGTTGCTGCTGGTGAGGATGTTGGCCAGAAAATTATGTTATTTATGCAACAAAGTAGGCGTGAGATGTGCATTCTGTCTGCTTCTGGTTCCATCTCTAATGCCTCTCTTCGCCAGCCAGCAACTTCAGGAGGCAACATTACATATGAGGGTCGGTTTGAGATTATTTCACTTACTGGTTCCTATGTCCGAAATGAACTTGGAGGTCGATCTGGTGGTCTTAGTGTATGCCTATCTAATACTGATGGACAAATCATAGGTGGTGGAGTTGGTGGGCCCCTTAAAGCAGCTGGTCCAGTTCAGGTCATTGTTGGTACTTTCTTTATTGACACCAAGAAGGATACTGGTGTTGGTGTAAAAGGTGATGCCTCTGCCCCCAAGTTGCCATCACCAGTTGGCGAACCAGTATCAAGTTTAAATTTCCGTCAAACAGTTGACTCTTCAAACACAAATCCAATCCGCGGAAATGATGAGCATCAAGCTATAGGGGGAAGTCATTTCATGATTCAACAGCTTGGTTTGCACGCAACACCTCCGCGGTCCACAGACTGGGGGGGTCGTCCGGATTCAAGAAATACTGGTTTTGAGCTGACAGGAAGAACAGGTCATGGGGCACACCAGTCTCCTGAGAATGGTGGGTATGAGCAAATTCCGGATTGA 1047 0.4947 MEPNDNQLSSFFHHHHHHHHHQQPSTAATTTASPTNGLLPNADGSHMLYPHSVASAVSSQLEPAKRKRGRPRKYGTPEQALAAKKAATTSSQSFSSEKKTHSSPFPYSSKKSHSFALGNAGQGFTPHVISVAAGEDVGQKIMLFMQQSRREMCILSASGSISNASLRQPATSGGNITYEGRFEIISLTGSYVRNELGGRSGGLSVCLSNTDGQIIGGGVGGPLKAAGPVQVIVGTFFIDTKKDTGVGVKGDASAPKLPSPVGEPVSSLNFRQTVDSSNTNPIRGNDEHQAIGGSHFMIQQLGLHATPPRSTDWGGRPDSRNTGFELTGRTGHGAHQSPENGGYEQIPD* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0863 348 MobiDBLite consensus disorder prediction 83 112 - -
Apr4g0863 348 MobiDBLite consensus disorder prediction 305 348 - -
Apr4g0863 348 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 340 IPR039605 GO:0003680
Apr4g0863 348 MobiDBLite consensus disorder prediction 24 40 - -
Apr4g0863 348 SUPERFAMILY AF0104/ALDC/Ptd012-like 122 236 - -
Apr4g0863 348 Pfam Plants and Prokaryotes Conserved (PCC) domain 126 236 IPR005175 -
Apr4g0863 348 MobiDBLite consensus disorder prediction 1 112 - -
Apr4g0863 348 CDD DUF296 125 236 IPR005175 -
Apr4g0863 348 Gene3D - 126 249 - -
Apr4g0863 348 ProSiteProfiles PPC domain profile profile. 120 258 IPR005175 -
Apr4g0863 348 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 1 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0863 Apr-Chr4 6960247 6965447 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0863 7 348 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 50.649 7.54e-91 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0863 - - gmx:100809675 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0863 4 6960247 6965447 Apr4g0863 4 6960247 6965447 ECH