Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr4g0861 ATGCAGCATCGACAAATTAATATGGCGAACCGGTGGTGGACCGACTCGGTTGGGCTGGGCGGGGTTGACACCTCTTCTTCCCCCATCAAAAAACCGGATCTGGGCTTTTCCATAAACGACACCGTATCGGCACCACCCACAGTGAACCACGGCGCAGAAGAGAAAGAAAACAGTGAAGATCCCAAAGAGGGAGCCATAGAGGTCTCAACACCACGCAGGCCCAGGGGCCGCCCACCGGGCTCCAAGAACAAGCCCATACCGCCCATATTCGTGACCCGCGACAGCCCTAACGTTCTCCGAAGCCACGTCATGGAGATAGCAAACGGAACTGACATCGCTGACAGCCTCAGTCAGTTCGCCAGAAAACGCCAAAGAGGTATCTGCGTTCTCAGCGCCACCGGCACCGTCGCCAACGTCACTCTCCGGCACCCAACCGCTCCCGGCGCCGTCATGCCACTCCACGGCCGGTTCGAGATCATTTCGCTGACCGGTTCGTTCTTGCCTGGACCGTCCCCACCCGGTTCGAGCGGTTTGACCGTTTACATGGCGGGAGGACAGGGACAAGTTGTTGGCGGTGGAGTGGTGGGTCCATTGGTGGCTTCAGGAGCGGTTATGATAATGGTGGCTACGTTTTCCAATGCTGTGTATGAGAGATTACCTATTGAGGATGATGAAGACGATGAAGGACATGGTGGGGTGGTTCGTGGAGAGGGTTCGTCCTCGAATCTGATGTATAATAGTAACAATTTGGATTTGGGTGGTGCTCCGAATCTGCAACAGTTGAATCATGAAGCTTATTCTCCTTGGTCGCTTGGTCATGCTAGACCACCCTTTTGA 837 0.5508 MQHRQINMANRWWTDSVGLGGVDTSSSPIKKPDLGFSINDTVSAPPTVNHGAEEKENSEDPKEGAIEVSTPRRPRGRPPGSKNKPIPPIFVTRDSPNVLRSHVMEIANGTDIADSLSQFARKRQRGICVLSATGTVANVTLRHPTAPGAVMPLHGRFEIISLTGSFLPGPSPPGSSGLTVYMAGGQGQVVGGGVVGPLVASGAVMIMVATFSNAVYERLPIEDDEDDEGHGGVVRGEGSSSNLMYNSNNLDLGGAPNLQQLNHEAYSPWSLGHARPPF* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr4g0861 278 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 15 241 IPR014476 GO:0003680
Apr4g0861 278 Pfam Plants and Prokaryotes Conserved (PCC) domain 100 213 IPR005175 -
Apr4g0861 278 MobiDBLite consensus disorder prediction 15 93 - -
Apr4g0861 278 ProSiteProfiles PPC domain profile profile. 96 236 IPR005175 -
Apr4g0861 278 Gene3D - 99 228 - -
Apr4g0861 278 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 15 241 - -
Apr4g0861 278 MobiDBLite consensus disorder prediction 52 70 - -
Apr4g0861 278 CDD DUF296 100 167 IPR005175 -
Apr4g0861 278 SUPERFAMILY AF0104/ALDC/Ptd012-like 97 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr4g0861 Apr-Chr4 6945101 6946267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr4g0861 8 278 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 53.401 7.50e-84 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr4g0861 - - aprc:113863548 489.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr4g0861 4 6945101 6946267 Apr8g1568 8 25484759 25485604 ECH
Apr4g0861 4 6945101 6946267 Apr4g0861 4 6945101 6946267 ECH